RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 OR2A1Q8NGT9 310 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 EID2BQ96D98 161 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 SLC22A7Q9Y694 548 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 NCR1O76036 304 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 ANXA3P12429 323 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 FOXK2Q01167 660 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 FAM205BPQ63HN1 556 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 TMEM205Q6UW68 189 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 B3GLCTQ6Y288 498 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 SSX6Q7RTT6 188 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF611Q8N823 705 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 SLC2A12Q8TD20 617 aa15.36■□□□□ 0.05
SCN3B-202ENST00000392770 PTHP01270 115 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 TMEM225BP0DP42 221 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 PVALBP20472 110 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 TMEM176BQ3YBM2 270 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 NXNL2Q5VZ03 156 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 POTEKPQ9BYX7 375 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ZSCAN5BA6NJL1 495 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 EPHA4P54764 986 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 SYNPRQ8TBG9 265 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 NRSN2Q9GZP1 204 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ACAD8Q9UKU7 415 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 BOKQ9UMX3 212 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF850A8MQ14 1090 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 PTTG1O95997 202 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 RBMXP38159 391 aaKnown RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 C17orf67Q0P5P2 114 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 P2RY14Q15391 338 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 TMEM201Q5SNT2 666 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 SENP5Q96HI0 755 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF442Q9H7R0 627 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 LTB4R2Q9NPC1 389 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 PARPBPQ9NWS1 579 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 PCDHGA6Q9Y5G7 932 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 METTL15A6NJ78 407 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 C3orf38Q5JPI3 329 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ANKRD53Q8N9V6 530 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 OR51T1Q8NGJ9 327 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ELOVL3Q9HB03 270 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 NLKQ9UBE8 527 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 PDE4DIPQ5VU43 2346 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 SOCS6O14544 535 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 CSO75390 466 aaKnown RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 MMP11P24347 488 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 RPS25P62851 125 aaKnown RBP15.35■□□□□ 0.05
SCN3B-202ENST00000392770 SYT13Q7L8C5 426 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 ASB17Q8WXJ9 295 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 NMNAT3Q96T66 252 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 PLEK2Q9NYT0 353 aa15.35■□□□□ 0.05
SCN3B-202ENST00000392770 GOLGA4Q13439 2230 aaKnown RBP15.34■□□□□ 0.05
SCN3B-202ENST00000392770 MEGF11A6BM72 1044 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 A6NLC8 198 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 ARHGAP33O14559 1287 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 CRTAPO75718 401 aaPredicted RBP15.34■□□□□ 0.05
SCN3B-202ENST00000392770 CD160O95971 181 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 TFAP2AP05549 437 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 CASP6P55212 293 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 SLC35F3Q8IY50 421 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 KCNS2Q9ULS6 477 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 G3V3Y1 287 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 APLNRP35414 380 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 CNOT9Q92600 299 aaKnown RBP15.34■□□□□ 0.05
SCN3B-202ENST00000392770 SLC41A2Q96JW4 573 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 DUSP22Q9NRW4 184 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 HSPB11Q9Y547 144 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 NUP205Q92621 2012 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 CHP2O43745 196 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 HTR3BO95264 441 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 SLC1A3P43003 542 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 DHRS4L2Q6PKH6 230 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 UNQ6126/PRO20091Q6UXV3 157 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 BCORP1Q8N888 145 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 OR52I1Q8NGK6 324 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 ACER3Q9NUN7 267 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 LYRM1O43325 122 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 OR7A10O76100 309 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 SIMC1Q8NDZ2 872 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 SDF2Q99470 211 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 CDH20Q9HBT6 801 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 TRIM23P36406 574 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 C5orf46Q6UWT4 87 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 SFTPA1Q8IWL2 248 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 POGLUT1Q8NBL1 392 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 GALNT11Q8NCW6 608 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 DUS3LQ96G46 650 aaKnown RBP15.34■□□□□ 0.05
SCN3B-202ENST00000392770 ASB4Q9Y574 426 aa15.34■□□□□ 0.05
SCN3B-202ENST00000392770 PARP14Q460N5 1801 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF593O00488 134 aaPredicted RBP15.33■□□□□ 0.05
SCN3B-202ENST00000392770 GPR50Q13585 617 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 HTR4Q13639 388 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 LRRC37A5PQ49AS3 106 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 DPY19L2P2Q6ZN68 376 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 GABARAPL1Q9H0R8 117 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 CHRDQ9H2X0 955 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 MGAT4CQ9UBM8 478 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 TRIP11Q15643 1979 aa15.33■□□□□ 0.05
SCN3B-202ENST00000392770 C2orf72A6NCS6 295 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 NSA2O95478 260 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms