RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 MOKQ9UQ07 419 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 PRELID1Q9Y255 219 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 RASD1Q9Y272 281 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 PPIAL4AQ9Y536 164 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 BZW2Q9Y6E2 419 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TTC41PQ6P2S7 1318 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MROH5Q6ZUA9 1318 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 FMN1Q68DA7 1419 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 SNAPC4Q5SXM2 1469 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TEX14Q8IWB6 1497 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MBD5Q9P267 1494 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 MRC2Q9UBG0 1479 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 EFCAB5A4FU69 1503 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 CUX1P39880 1505 aa2.3□□□□□ -2.04
PTPRC-205ENST00000391970 SUPT6HQ7KZ85 1726 aaKnown RBP2.3□□□□□ -2.04
PTPRC-205ENST00000391970 TUBGCP6Q96RT7 1819 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CEP152O94986 1710 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 TARBP1Q13395 1621 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 TTC37Q6PGP7 1564 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 LAMC3Q9Y6N6 1575 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ABCC3O15438 1527 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ADGRB3O60242 1522 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF518AQ6AHZ1 1483 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 HFM1A2PYH4 1435 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 PTPRTO14522 1441 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 YTHDC2Q9H6S0 1430 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 NUP155O75694 1391 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CPDO75976 1380 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 NSD2O96028 1365 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 MSH6P52701 1360 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 PLEKHG1Q9ULL1 1385 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 MYO3BQ8WXR4 1341 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 IGHV2-70DA0A0C4DH43 119 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 KLF18A0A0U1RQI7 1052 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 DHRS7CA6NNS2 312 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ZNF705EA8MWA4 302 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 GPR89AB7ZAQ6 455 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 FCN1O00602 326 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 NDUFAB1O14561 156 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 HAT1O14929 419 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 POLR3GO15318 223 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 YKT6O15498 198 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 TAPBPO15533 448 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SULT1B1O43704 296 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SLITRK3O94933 977 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 PAHP00439 452 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 GPR89BP0CG08 455 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CTRB1P17538 263 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 M6PRP20645 277 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CYP2B6P20813 491 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 S100A1P23297 94 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 GLRA2P23416 452 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 NMT1P30419 496 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 HOXA6P31267 233 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 GBX2P52951 348 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 MRPS25P82663 173 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 MECOMQ03112 1051 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 GPM6BQ13491 265 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 RIPK1Q13546 671 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 KIAA0040Q15053 153 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 OR2B11Q5JQS5 317 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 C10orf120Q5SQS8 335 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CCNJQ5T5M9 372 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ATF7IP2Q5U623 682 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 LIPNQ5VXI9 398 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CTRB2Q6GPI1 263 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 C17orf82Q86X59 251 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CEP112Q8N8E3 955 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CCDC112Q8NEF3 446 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 OR2A12Q8NGT7 310 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 TRMT10AQ8TBZ6 339 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ZPLD1Q8TCW7 415 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SLC5A11Q8WWX8 675 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 BADQ92934 168 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 EMG1Q92979 244 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 HAVCR1Q96D42 359 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 PELI1Q96FA3 418 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SERAC1Q96JX3 654 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 C7orf34Q96L11 122 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 TGM7Q96PF1 710 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CYP2S1Q96SQ9 504 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 EDEM2Q9BV94 578 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SPZ1Q9BXG8 430 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 NXF5Q9H1B4 397 aaKnown RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 GORASP2Q9H8Y8 452 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SMPD3Q9NY59 655 aaPredicted RBP2.29□□□□□ -2.04
PTPRC-205ENST00000391970 B3GNT2Q9NY97 397 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 PIPOXQ9P0Z9 390 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 OR1A1Q9P1Q5 309 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 TBK1Q9UHD2 729 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 KLHL21Q9UJP4 597 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 RPH3ALQ9UNE2 315 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SCML2Q9UQR0 700 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 PDE10AQ9Y233 779 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 VSIG4Q9Y279 399 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CA5BQ9Y2D0 317 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 SMAD5-AS1Q9Y6J3 95 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 ABCA7Q8IZY2 2146 aa2.29□□□□□ -2.04
PTPRC-205ENST00000391970 CHD1O14646 1710 aa2.28□□□□□ -2.04
PTPRC-205ENST00000391970 RIMS1Q86UR5 1692 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms