RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CCDC114Q96M63 670 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 RNF5Q99942 180 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CITED1Q99966 193 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 P2RY13Q9BPV8 354 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TM2D3Q9BRN9 247 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF649Q9BS31 505 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NDUFAF3Q9BU61 184 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CENPOQ9BU64 300 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ZSCAN5AQ9BUG6 496 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 THUMPD3Q9BV44 507 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TBC1D10AQ9BXI6 508 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ERVK-6Q9BXR3 956 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CRNKL1Q9BZJ0 848 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NACA2Q9H009 215 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 COMMD4Q9H0A8 199 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 TRPV6Q9H1D0 765 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SIAEQ9HAT2 523 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SLCO1B3Q9NPD5 702 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PARP11Q9NR21 331 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 DNAJC17Q9NVM6 304 aaKnown RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GPATCH2LQ9NWQ4 482 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SMPD3Q9NY59 655 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 AKAP7Q9P0M2 348 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 GALPQ9UBC7 116 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CRLS1Q9UJA2 301 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 CDH7Q9ULB5 785 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SLC25A15Q9Y619 301 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NFASCO94856 1347 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 MN1Q10571 1320 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 ARID4BQ4LE39 1312 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 NACADO15069 1562 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 SCN4AP35499 1836 aa0.06□□□□□ -2.4
SNORD28-201ENST00000384706 RPAP1Q9BWH6 1393 aaPredicted RBP0.06□□□□□ -2.4
SNORD28-201ENST00000384706 PHF3Q92576 2039 aaKnown RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 IGKV1D-8A0A087WSZ0 117 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 IGKV1D-43A0A0B4J1Z2 117 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 IGHV3-66A0A0C4DH42 116 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM223A0PJW6 202 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 C5orf51A6NDU8 294 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 FBLL1A6NHQ2 334 aaKnown RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC69A6NI79 296 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF98A6NK75 572 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 FAM74A7A6NL05 159 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 PP2D1A8MPX8 630 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 H7C0S8 307 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 PEX7O00628 323 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ALOX15BO15296 676 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 RAD51BO15315 384 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 MBTPS2O43462 519 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF207O43670 478 aaKnown RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ZBTB14O43829 449 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 TPST2O60704 377 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 STX11O75558 287 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 GNA14O95837 355 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 CCNE2O96020 404 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 APOA4P06727 396 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 HBQ1P09105 142 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 UBTFL1P0CB47 393 aaPredicted RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 H2AFXP16104 143 aaPredicted RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ABOP16442 354 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF18P17022 549 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 TCP1P17987 556 aaKnown RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 VCLP18206 1134 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 OMGP23515 440 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ANXA13P27216 316 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 MARCKSP29966 332 aaPredicted RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 CTNNB1P35222 781 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 OPRK1P41145 380 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 GLP1RP43220 463 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 RAD52P43351 418 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 MAGEA4P43358 317 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 GYG1P46976 350 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 CCL11P51671 97 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 PRRX1P54821 245 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 RBX1P62877 108 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ASIC1P78348 528 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 NTHL1P78549 312 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 GALK2Q01415 458 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 PRB3Q04118 309 aaPredicted RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 TFCP2Q12800 502 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 CUL1Q13616 776 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF235Q14590 738 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 IHHQ14623 411 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 KIAA0087Q14695 138 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 MAPRE1Q15691 268 aaKnown RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ATP6AP1Q15904 470 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 GUCA2BQ16661 112 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 NSUN5P1Q3KNT7 163 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 LRIT3Q3SXY7 679 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 FAM74A3Q4VXF1 159 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 SLC10A5Q5PT55 438 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 TIGD3Q6B0B8 471 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 C11orf71Q6IPW1 123 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 ADNP2Q6IQ32 1131 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 LCN12Q6JVE5 192 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 FAM199XQ6PEV8 388 aaPredicted RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 CCDC137Q6PK04 289 aaKnown RBP0.05□□□□□ -2.4
SNORD28-201ENST00000384706 SPINT4Q6UDR6 99 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 LYPD2Q6UXB3 125 aa0.05□□□□□ -2.4
SNORD28-201ENST00000384706 UNQ9165/PRO28630Q6UXU0 137 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms