RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NEK3P51956 506 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ARHGDIAP52565 204 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 PLK1P53350 603 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 SH3BGRP55822 239 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 DCAF7P61962 342 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 RBBP4Q09028 425 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 C17orf67Q0P5P2 114 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF816Q0VGE8 651 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 GRB14Q14449 540 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 OPCMLQ14982 345 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ALX1Q15699 326 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 LONRF1Q17RB8 773 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 UGT3A2Q3SY77 523 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 INTS11Q5TA45 600 aaKnown RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 TMEM53Q6P2H8 277 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 IDO2Q6ZQW0 420 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 USP50Q70EL3 339 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 CAMK2N1Q7Z7J9 78 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 SLFN11Q7Z7L1 901 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF546Q86UE3 836 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 LUZP1Q86V48 1076 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 PRR15Q8IV56 129 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 MFN1Q8IWA4 741 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 AQP12AQ8IXF9 295 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 MMD2Q8IY49 270 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 CLEC4FQ8N1N0 589 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 C10orf126Q8N4M7 172 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 RPP25LQ8N5L8 163 aaKnown RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 TRIML2Q8N7C3 387 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 GBP7Q8N8V2 638 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF680Q8NEM1 530 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 FDCSPQ8NFU4 85 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 SETD6Q8TBK2 473 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 DTX3LQ8TDB6 740 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 C7orf33Q8WU49 177 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 POMGNT1Q8WZA1 660 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZKSCAN4Q969J2 545 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 KIAA1191Q96A73 305 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 BIRC7Q96CA5 298 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 TIMD4Q96H15 378 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 KCNA7Q96RP8 456 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 AGMATQ9BSE5 352 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 CRACR2AQ9BSW2 395 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 FNDC11Q9BVV2 318 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 NFKBIZQ9BYH8 718 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 REG4Q9BYZ8 158 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 GPR61Q9BZJ8 451 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZMYND12Q9H0C1 365 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 HSD3B7Q9H2F3 369 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 OR51B5Q9H339 312 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 NARFLQ9H6Q4 476 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 DCTPP1Q9H773 170 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 PHPT1Q9NRX4 125 aaPredicted RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF355PQ9NSJ1 428 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 CNOT8Q9UFF9 292 aaKnown RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 DDX20Q9UHI6 824 aaKnown RBP-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 KPTNQ9Y664 436 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 SCN10AQ9Y5Y9 1956 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 ITIH6Q6UXX5 1313 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 GRIN2BQ13224 1484 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 C1orf167Q5SNV9 1468 aa-1.51□□□□□ -2.65
RNU6-540P-201ENST00000384622 DOCK1Q14185 1865 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 IGLV1-36A0A0B4J1U3 117 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 A0A0B4J203 849 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 E2F8A0AVK6 867 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 PI4KAP2A4QPH2 592 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 LIPT2A6NK58 231 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 FNDC10F2Z333 226 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 C5orf67F2Z3F1 127 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 KIF2AO00139 706 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 BTN3A3O00478 584 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 LAD1O00515 517 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 PSMD3O43242 534 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SCN2BO60939 215 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ENTPD5O75356 428 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MED24O75448 989 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 KLF7O75840 302 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 S1PR2O95136 353 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SLC2A10O95528 541 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 NPPAP01160 153 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 GH2P01242 217 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 IGHV1-46P01743 117 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 HIST1H2ABP04908 130 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 KLK3P07288 261 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 UBTFL1P0CB47 393 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 HIST1H2ADP20671 130 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 IMPDH1P20839 514 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 IGFBP5P24593 272 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MAPK3P27361 379 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MIPP30301 263 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 CETN2P41208 172 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ARHGDIBP52566 201 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF140P52738 457 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 EFNB2P52799 333 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 GBX2P52951 348 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 BTN3A2P78410 334 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 HOXC5Q00444 222 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 CHRNB3Q05901 458 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ACSM1Q08AH1 577 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SMARCB1Q12824 385 aa-1.52□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms