RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SYNDIG1LA6NDD5 238 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 MEIS3P1A6NDR6 274 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 OR5H14A6NHG9 310 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 PCDH8O95206 1070 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 SLC2A10O95528 541 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 THEGLP0DJG4 465 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 NME2P22392 152 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 OR1E1P30953 314 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
VLDLR-202ENST00000382099 CD80P33681 288 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 MNDAP41218 407 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 RPS10P46783 165 aaKnown RBP13.93□□□□□ -0.18
VLDLR-202ENST00000382099 MC1RQ01726 317 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 DOC2AQ14183 400 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 NDUFAF7Q7L592 441 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF485Q8NCK3 441 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 OR4E2Q8NGC2 313 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 OR8S1Q8NH09 359 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 TMEM40Q8WWA1 233 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 NECAB3Q96P71 396 aaPredicted RBP13.93□□□□□ -0.18
VLDLR-202ENST00000382099 FN3KRPQ9HA64 309 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 IL21RQ9HBE5 538 aa13.93□□□□□ -0.18
VLDLR-202ENST00000382099 A0A0G2JK05 382 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 PPIHO43447 177 aaKnown RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF7P17097 686 aaPredicted RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 RING1Q06587 406 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF385BQ569K4 471 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ELFN2Q5R3F8 820 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ACBD7Q8N6N7 88 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 INO80EQ8NBZ0 244 aaPredicted RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 OR2L5Q8NG80 312 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 SMPDL3BQ92485 455 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 AKR1E2Q96JD6 320 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 RHOFQ9HBH0 211 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ACKR4Q9NPB9 350 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 TRAV14DV4A0A0A6YYC5 116 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 SAP18O00422 153 aaKnown RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 PIRO00625 290 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 HOXA6P31267 233 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 AP1S1P61966 158 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ARHGAP1Q07960 439 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 REEP3Q6NUK4 255 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 FCRLAQ7L513 359 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 SIRT6Q8N6T7 355 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 OR6K2Q8NGY2 324 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 OCSTAMPQ9BR26 566 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ZNF350Q9GZX5 532 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 NMRK2Q9NPI5 230 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 OR2S2Q9NQN1 319 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 OTOFQ9HC10 1997 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 PNPLA4P41247 253 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 RBM34P42696 430 aaKnown RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 RNF144AP50876 292 aaPredicted RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 PKIAP61925 76 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 LIN54Q6MZP7 749 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 KCNRGQ8N5I3 272 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 OSTF1Q92882 214 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 AMDHD1Q96NU7 426 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 C2orf88Q9BSF0 95 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 CHST6Q9GZX3 395 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 P2RY12Q9H244 342 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 RCC2Q9P258 522 aaKnown RBP13.92□□□□□ -0.18
VLDLR-202ENST00000382099 LAMP5Q9UJQ1 280 aa13.92□□□□□ -0.18
VLDLR-202ENST00000382099 NPIPB9F8W1W9 429 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 GABARAPH6UMI1 98 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PHOX2AO14813 284 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 IFNA17P01571 189 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 SAGP10523 405 aaPredicted RBP13.91□□□□□ -0.18
VLDLR-202ENST00000382099 LIPCP11150 499 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 HIST1H1BP16401 226 aaKnown RBP13.91□□□□□ -0.18
VLDLR-202ENST00000382099 LAG3P18627 525 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 ACKR3P25106 362 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PGFP49763 221 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 SMIM11AP58511 58 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 SHC2P98077 582 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 TWF1Q12792 350 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PPA1Q15181 289 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PCGF3Q3KNV8 242 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 UBXN11Q5T124 520 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 OLIG3Q7RTU3 272 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 SERPINA9Q86WD7 417 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 CPOQ8IVL8 374 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 C17orf47Q8NEP4 570 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PPP1R16AQ96I34 528 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 ACBD6Q9BR61 282 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 MED20Q9H944 212 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 SIRT7Q9NRC8 400 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 TMEM248Q9NWD8 314 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 ABRACLQ9P1F3 81 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 KCND3Q9UK17 655 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PCDHB1Q9Y5F3 818 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PRSS21Q9Y6M0 314 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 DNAJC25-GNG10A0A024R161 153 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 TMEM272A0A1B0GTI8 110 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 GSTZ1O43708 216 aaPredicted RBP13.91□□□□□ -0.18
VLDLR-202ENST00000382099 CD53P19397 219 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PSMA3P25788 255 aa13.91□□□□□ -0.18
VLDLR-202ENST00000382099 PYCR1P32322 319 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms