RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SLC6A18Q96N87 628 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 MAP3K3Q99759 626 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 KIR3DX1Q9H7L2 352 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 CD27P26842 260 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 PRSS3P35030 304 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 KIAA1024LP59773 190 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 NLGN4YQ8NFZ3 816 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-201ENST00000378156 VRK1Q99986 396 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ZDHHC5Q9C0B5 715 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 NELFAQ9H3P2 528 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 GLIPR2Q9H4G4 154 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 FGF21Q9NSA1 209 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF701Q9NV72 531 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-201ENST00000378156 MMP17Q9ULZ9 603 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 KNTC1P50748 2209 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 A6NIZ1 184 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 PKLRP30613 574 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 RAP1BP61224 184 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 RAP1AP62834 184 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 PGGHGQ32M88 737 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 HES5Q5TA89 166 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 WBP2NLQ6ICG8 309 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 C3P1Q6ZMU1 363 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 NRARPQ7Z6K4 114 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 SLC35F2Q8IXU6 374 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 MFFQ9GZY8 342 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 OR2A25A4D2G3 310 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ASPDHA6ND91 283 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 SULT2B1O00204 365 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 CPNE6O95741 557 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ACP2P11117 423 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 GLO1Q04760 184 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 GALEQ14376 348 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 GPR19Q15760 415 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ACBD4Q8NC06 268 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 OR7G1Q8NGA0 311 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 NINJ1Q92982 152 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 NEURL3Q96EH8 262 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 SEMA6CQ9H3T2 930 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 TMEM38AQ9H6F2 299 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF226Q9NYT6 803 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 TESQ9UGI8 421 aaKnown RBP13.98□□□□□ -0.17
NPHP4-201ENST00000378156 ATG4BQ9Y4P1 393 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 C11orf91Q3C1V1 193 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 MMP21Q8N119 569 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 SIMC1Q8NDZ2 872 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 HMGCLL1Q8TB92 370 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 SLC37A2Q8TED4 501 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 AMDHD1Q96NU7 426 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 PRR14Q9BWN1 585 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 PHF7Q9BWX1 381 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-201ENST00000378156 AK6Q9Y3D8 172 aaKnown RBP13.97□□□□□ -0.17
NPHP4-201ENST00000378156 KLK4Q9Y5K2 254 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 PAPPA2Q9BXP8 1791 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.97□□□□□ -0.17
NPHP4-201ENST00000378156 COL4A5P29400 1685 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 TRAV27A0A087WT01 109 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 POM121BA6NF01 834 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 SCRG1O75711 98 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 MAOAP21397 527 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 ELAVL4P26378 380 aaKnown RBP13.97□□□□□ -0.17
NPHP4-201ENST00000378156 BCL6P41182 706 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 DAP3P51398 398 aaKnown RBP13.97□□□□□ -0.17
NPHP4-201ENST00000378156 MALLQ13021 153 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 H3BUI4 141 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 DIRAS3O95661 229 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 ARL3P36405 182 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 TSFMP43897 325 aaKnown RBP13.97□□□□□ -0.17
NPHP4-201ENST00000378156 ILKQ13418 452 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF750Q32MQ0 723 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 LAX1Q8IWV1 398 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 BORCS8Q96FH0 119 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 APMAPQ9HDC9 416 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 INIPQ9NRY2 104 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 ASF1BQ9NVP2 202 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 PARPBPQ9NWS1 579 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 WBP1LQ9NX94 342 aa13.97□□□□□ -0.17
NPHP4-201ENST00000378156 TRBV11-1A0A0K0K1C0 115 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 GOSR2O14653 212 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 LSSP48449 732 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 POU3F4P49335 361 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 OR7A5Q15622 319 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 LTB4RQ15722 352 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 PYCR3Q53H96 274 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 AKR1C8PQ5T2L2 129 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 CD300LGQ6UXG3 332 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 RBM45Q8IUH3 476 aaKnown RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 NSG1A0A0A6YYJ2 146 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 PLPP1O14494 284 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 IL1AP01583 271 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 CSF1P09603 554 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF16P17020 682 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 HTR3AP46098 478 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 DLX5P56178 289 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 ZP2Q05996 745 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 SOWAHCQ53LP3 525 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-201ENST00000378156 OR5M10Q6IEU7 315 aa13.96□□□□□ -0.17
NPHP4-201ENST00000378156 SLC48A1Q6P1K1 146 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms