RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 A0A1B0GX12 115 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 A0A1W2PNR3 127 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 ELOA3DA6NLF2 546 aaPredicted RBP11.87□□□□□ -0.51
CKAP2-202ENST00000378034 SULT2B1O00204 365 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 CLDN14O95500 239 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 RNF224P0DH78 156 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TMIGD3P0DMS9 266 aaPredicted RBP11.87□□□□□ -0.51
CKAP2-202ENST00000378034 CCNA2P20248 432 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 OPRM1P35372 400 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 DIO1P49895 249 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 BNIP2Q12982 314 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 NPTX1Q15818 432 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 ZNF239Q16600 458 aaKnown RBP11.87□□□□□ -0.51
CKAP2-202ENST00000378034 ELOA3BQ3SY89 546 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 ALG10BQ5I7T1 473 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 ELOA3Q8NG57 546 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 VANGL1Q8TAA9 524 aaPredicted RBP11.87□□□□□ -0.51
CKAP2-202ENST00000378034 FNDC9Q8TBE3 224 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 CA5BP1Q8WTZ4 195 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 SLC38A4Q969I6 547 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 TPD52L3Q96J77 140 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 SFXN3Q9BWM7 321 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 EGFL7Q9UHF1 273 aa11.87□□□□□ -0.51
CKAP2-202ENST00000378034 DOCK7Q96N67 2140 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 KIAA1549Q9HCM3 1950 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 DVL2O14641 736 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 ATP5HO75947 161 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 SERPINA1P01009 418 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 MYBPHQ13203 477 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 CEACAM7Q14002 265 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 SLC25A35Q3KQZ1 300 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 CCDC71Q8IV32 467 aaPredicted RBP11.86□□□□□ -0.51
CKAP2-202ENST00000378034 SLC43A2Q8N370 569 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 OR4D11Q8NGI4 311 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 ZHX1-C8orf76Q96EF9 292 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 MUC13Q9H3R2 512 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 GP6Q9HCN6 339 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 SAMD4AQ9UPU9 718 aaKnown RBP11.86□□□□□ -0.51
CKAP2-202ENST00000378034 DOPEY1Q5JWR5 2465 aa11.86□□□□□ -0.51
CKAP2-202ENST00000378034 A0A087WUJ7 227 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 TRAPPC13A5PLN9 417 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 NPIPB7O75200 414 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 ZNF682O95780 498 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 NCK1P16333 377 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 TCN1P20061 433 aaPredicted RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 ENPP1P22413 925 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 AGFG1P52594 562 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 SLC35A1P78382 337 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 BNIP1Q12981 228 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 FAM156AQ8NDB6 213 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 GEMIN6Q8WXD5 167 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 ARL5BQ96KC2 179 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 PSMG3-AS1Q96PY0 264 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 SRXN1Q9BYN0 137 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 DCAF13Q9NV06 445 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 PACSIN3Q9UKS6 424 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 KLF2Q9Y5W3 355 aaPredicted RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 SNX13Q9Y5W8 968 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 CHP2O43745 196 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 EIF1BO60739 113 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 AQP8O94778 261 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 IDUAP35475 653 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 RASSF2P50749 326 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 CDH12P55289 794 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 IFI44LQ53G44 452 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 PPP4R4Q6NUP7 873 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 FCRLAQ7L513 359 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 RBM45Q8IUH3 476 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 ADAMTS16Q8TE57 1224 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 RNF128Q8TEB7 428 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 INTS12Q96CB8 462 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 GMPPAQ96IJ6 420 aaPredicted RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 MPP4Q96JB8 637 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
CKAP2-202ENST00000378034 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
CKAP2-202ENST00000378034 MED12LQ86YW9 2145 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 ZC3H12DA2A288 527 aaKnown RBP11.84□□□□□ -0.51
CKAP2-202ENST00000378034 CPSF4LA6NMK7 179 aaKnown RBP11.84□□□□□ -0.51
CKAP2-202ENST00000378034 GYG2O15488 501 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 OR2T1O43869 369 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 PRKD3O94806 890 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 IFNW1P05000 195 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 GPIP06744 558 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 THRBP10828 461 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 IFNA8P32881 189 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 C1orf140Q5VVS0 124 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 PLXDC2Q6UX71 529 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 FKBP9P1Q75LS8 142 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 MCEMP1Q8IX19 187 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 OR6S1Q8NH40 331 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 POP5Q969H6 163 aaKnown RBP11.84□□□□□ -0.51
CKAP2-202ENST00000378034 HSH2DQ96JZ2 352 aa11.84□□□□□ -0.51
CKAP2-202ENST00000378034 NSMCE2Q96MF7 247 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms