RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ZNF322Q6U7Q0 402 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 KMT5CQ86Y97 462 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 SLC35F3Q8IY50 421 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NMNAT3Q96T66 252 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 RBM24Q9BX46 236 aaKnown RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 UCKL1Q9NWZ5 548 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 RBMX2Q9Y388 322 aaKnown RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 PCYT1BQ9Y5K3 369 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 A6NCN8 305 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 ZIC1Q15915 447 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 GALNTL5Q7Z4T8 443 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 GPR137CQ8N3F9 429 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 SLC37A3Q8NCC5 494 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NXF5Q9H1B4 397 aaKnown RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 GVINP1Q7Z2Y8 2422 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 GJE1A6NN92 205 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 CSTBP04080 98 aaKnown RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 GDI2P50395 445 aaKnown RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 C21orf58P58505 322 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 SLC6A19Q695T7 634 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 C8orf82Q6P1X6 216 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NAXEQ8NCW5 288 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 DMRTB1Q96MA1 342 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 GABARAPL3Q9BY60 117 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 UPB1Q9UBR1 384 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
TCOF1-202ENST00000377797 SPTBP11277 2137 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SCN3AQ9NY46 2000 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 TMED7-TICAM2A0A0A6YYA0 188 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 G3V3Y1 287 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 H7C1C5 153 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 RAD1O60671 282 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 GRK5P34947 590 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 POLR2HP52434 150 aaKnown RBP13.38□□□□□ -0.27
TCOF1-202ENST00000377797 HNRNPFP52597 415 aaKnown RBP13.38□□□□□ -0.27
TCOF1-202ENST00000377797 LCN6P62502 163 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 MISPQ8IVT2 679 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 CHRDQ9H2X0 955 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 TMED7Q9Y3B3 224 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 TRBV5-3A0A0A0MS03 114 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 CDK4P11802 303 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ICAM2P13598 275 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ADH7P40394 386 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 OR3A3P47888 321 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 OR3A2P47893 321 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 TMEM176BQ3YBM2 270 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ACSM3Q53FZ2 586 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 C3orf38Q5JPI3 329 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ALDH16A1Q8IZ83 802 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 CLEC1AQ8NC01 280 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 PGAM5Q96HS1 289 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 TMEM41AQ96HV5 264 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 GPATCH2Q9NW75 528 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SIRT5Q9NXA8 310 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 IGHV1OR21-1A0A087WYE8 117 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF208O43345 1280 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SEC14L2O76054 403 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SYT6Q5T7P8 510 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-202ENST00000377797 FNDC8Q8TC99 324 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ACOT12Q8WYK0 555 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 C8orf44Q96CB5 159 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 DUSP21Q9H596 190 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ZAR1LA6NP61 321 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF432O94892 652 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 BCKDHBP21953 392 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 S100A1P23297 94 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 TGFBR2P37173 567 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SYT14P1Q58G82 188 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 COL13A1Q5TAT6 717 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-202ENST00000377797 SGCDQ92629 289 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 CLEC2DQ9UHP7 191 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 PCOLCE2Q9UKZ9 415 aa13.38□□□□□ -0.27
TCOF1-202ENST00000377797 IGHV4-34P06331 123 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 PLP2Q04941 152 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 EIF2B1Q14232 305 aaKnown RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 RFT1Q96AA3 541 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 DPAGT1Q9H3H5 408 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 INPP5EQ9NRR6 644 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 DIMT1Q9UNQ2 313 aaKnown RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ISPDA4D126 451 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ATP1B1P05026 303 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 CD14P08571 375 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ZNF181Q2M3W8 571 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 UBE3DQ7Z6J8 389 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 SFTPA2Q8IWL1 248 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 C10orf111Q8N326 155 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ZG16BQ96DA0 208 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 EEF1E1O43324 174 aaKnown RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 JUNBP17275 347 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 GMFBP60983 142 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 BTN2A1Q7KYR7 527 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 SLC46A3Q7Z3Q1 461 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 DRAXINQ8NBI3 349 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-202ENST00000377797 MED11Q9P086 117 aa13.37□□□□□ -0.27
TCOF1-202ENST00000377797 TMEFF2Q9UIK5 374 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms