RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LINC01553A4QN01 128 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 SAP18O00422 153 aaKnown RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 QDPRP09417 244 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 NPSP0C0P6 89 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 TNFRSF1BP20333 461 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 SELENOWP63302 87 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 NTRK2Q16620 822 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 HNRNPA1L2Q32P51 320 aaKnown RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 TMEM255AQ5JRV8 349 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 ZNF660Q6AZW8 331 aaPredicted RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 TMUB2Q71RG4 321 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 NPAS3Q8IXF0 933 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 SYT14Q8NB59 555 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 OR9A1PQ8NGU1 263 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 ACOT11Q8WXI4 607 aaPredicted RBP14.37□□□□□ -0.11
FXN-201ENST00000377270 TGM7Q96PF1 710 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 CHRDQ9H2X0 955 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 CDH23Q9H251 3354 aa14.37□□□□□ -0.11
FXN-201ENST00000377270 RFXAPO00287 272 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 TGFB1P01137 390 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 IGF2P01344 180 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 C1GALT1C1LP0DN25 315 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 SNRPGP62308 76 aaKnown RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 E2F1Q01094 437 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 SURF2Q15527 256 aaPredicted RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 ZSWIM7Q19AV6 140 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 H3F3CQ6NXT2 135 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 GSG1LQ6UXU4 331 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 TMIGD1Q6UXZ0 262 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 ETFBKMTQ8IXQ9 262 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 FBXO15Q8NCQ5 510 aaPredicted RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 TM9SF4Q92544 642 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 MAL2Q969L2 176 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 GAL3ST4Q96RP7 486 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 TSPAN10Q9H1Z9 355 aaPredicted RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 CCDC86Q9H6F5 360 aaKnown RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 BEX1Q9HBH7 125 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 C2orf42Q9NWW7 574 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 DEC1Q9P2X7 70 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 OR10H1Q9Y4A9 318 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 SYNDIG1LA6NDD5 238 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 B4E171 279 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 MBTPS2O43462 519 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 LANCL1O43813 399 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 TFP02787 698 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 AGAP20933 346 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 C5AR1P21730 350 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 GAB1Q13480 694 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 OR52W1Q6IF63 320 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 KIAA1211LQ6NV74 962 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 ZNF547Q8IVP9 402 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 OR4K1Q8NGD4 311 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 OR4A15Q8NGL6 344 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 FOXRED1Q96CU9 486 aaPredicted RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 C1GALT1C1Q96EU7 318 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 ARL6Q9H0F7 186 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 SLC25A32Q9H2D1 315 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 SMOC1Q9H4F8 434 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 BARX1Q9HBU1 254 aaPredicted RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 DNAJC27Q9NZQ0 273 aa14.36□□□□□ -0.11
FXN-201ENST00000377270 RPL36Q9Y3U8 105 aaKnown RBP14.36□□□□□ -0.11
FXN-201ENST00000377270 EDDM13A0A1B0GTR0 161 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 C1orf226A1L170 272 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 AP4M1O00189 453 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 TLR4O00206 839 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 SPDEFO95238 335 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 CRYABP02511 175 aaKnown RBP14.35□□□□□ -0.11
FXN-201ENST00000377270 TCRBP04435 133 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 PRR5P85299 388 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 TAP2Q03519 686 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 GAMTQ14353 236 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 RGNQ15493 299 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 GSG1Q2KHT4 349 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 PLK5Q496M5 336 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 IER5LQ5T953 404 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 PAPD4Q6PIY7 484 aaKnown RBP14.35□□□□□ -0.11
FXN-201ENST00000377270 COMMD6Q7Z4G1 85 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 CAMKMTQ7Z624 323 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 ST7LQ8TDW4 575 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 RAB3CQ96E17 227 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 ZNF385AQ96PM9 386 aaKnown RBP14.35□□□□□ -0.11
FXN-201ENST00000377270 EFCAB11Q9BUY7 163 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 DPAGT1Q9H3H5 408 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 TMEM72A0PK05 275 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 FADS1O60427 444 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 FZD7O75084 574 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 DRD2P14416 443 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 MYOGP15173 224 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 OR1E2P47887 323 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 AVPR1BP47901 424 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 PNLIPRP1P54315 467 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 LSM6P62312 80 aaKnown RBP14.35□□□□□ -0.11
FXN-201ENST00000377270 BLOC1S1P78537 153 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 BIKQ13323 160 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 ELAVL3Q14576 367 aaKnown RBP14.35□□□□□ -0.11
FXN-201ENST00000377270 CRTC2Q53ET0 693 aaPredicted RBP14.35□□□□□ -0.11
FXN-201ENST00000377270 ZNF385BQ569K4 471 aa14.35□□□□□ -0.11
FXN-201ENST00000377270 PSRC1Q6PGN9 363 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms