RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 POLR2J2Q9GZM3 115 aaKnown RBP17.83■□□□□ 0.44
DDR1-228ENST00000376575 POLR2J3Q9H1A7 115 aaKnown RBP17.83■□□□□ 0.44
DDR1-228ENST00000376575 MUC13Q9H3R2 512 aa17.83■□□□□ 0.44
DDR1-228ENST00000376575 RNF122Q9H9V4 155 aa17.83■□□□□ 0.44
DDR1-228ENST00000376575 ACTR3BQ9P1U1 418 aa17.83■□□□□ 0.44
DDR1-228ENST00000376575 Q9UFV3 132 aa17.83■□□□□ 0.44
DDR1-228ENST00000376575 RPS6KA6Q9UK32 745 aa17.83■□□□□ 0.44
DDR1-228ENST00000376575 TRAPPC4Q9Y296 219 aa17.83■□□□□ 0.44
DDR1-228ENST00000376575 A0A1W2PNR3 127 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 SLC22A20A6NK97 555 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 A8MVM7 634 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 GYG2O15488 501 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 PMS2P2O95744 297 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 PNMTP11086 282 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 CDH12P55289 794 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 MS4A2Q01362 244 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 MYBPHQ13203 477 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 GUSBP1Q15486 140 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 CHMP1BQ7LBR1 199 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 VANGL1Q8TAA9 524 aaPredicted RBP17.82■□□□□ 0.44
DDR1-228ENST00000376575 FNDC9Q8TBE3 224 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 STK35Q8TDR2 534 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 ADAMTS16Q8TE57 1224 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 GEMIN6Q8WXD5 167 aaKnown RBP17.82■□□□□ 0.44
DDR1-228ENST00000376575 CPNE4Q96A23 557 aaPredicted RBP17.82■□□□□ 0.44
DDR1-228ENST00000376575 DDIT4LQ96D03 193 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 SLC47A1Q96FL8 570 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 HSH2DQ96JZ2 352 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 ZFP3Q96NJ6 502 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 OR5B2Q96R09 309 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 TM9SF2Q99805 663 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 THTPAQ9BU02 230 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 ZNF426Q9BUY5 554 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 TIGARQ9NQ88 270 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 SAMD4AQ9UPU9 718 aaKnown RBP17.82■□□□□ 0.44
DDR1-228ENST00000376575 RNF6Q9Y252 685 aa17.82■□□□□ 0.44
DDR1-228ENST00000376575 IGKV1D-42A0A075B6H8 117 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 DNPH1O43598 174 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 AQP8O94778 261 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 ZNF682O95780 498 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 SEMG1P04279 462 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 IMPDH2P12268 514 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 SLC7A1P30825 629 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 DIO1P49895 249 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 AGFG1P52594 562 aaKnown RBP17.81■□□□□ 0.44
DDR1-228ENST00000376575 SMSP52788 366 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 H3F3AP84243 136 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 SGCBQ16585 318 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 ZNF239Q16600 458 aaKnown RBP17.81■□□□□ 0.44
DDR1-228ENST00000376575 IFI44LQ53G44 452 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 XKRXQ6PP77 449 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 TSEN54Q7Z6J9 526 aaKnown RBP17.81■□□□□ 0.44
DDR1-228ENST00000376575 ZNF808Q8N4W9 903 aaPredicted RBP17.81■□□□□ 0.44
DDR1-228ENST00000376575 CLPTM1LQ96KA5 538 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 AMBRA1Q9C0C7 1298 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 RPS6KB2Q9UBS0 482 aa17.81■□□□□ 0.44
DDR1-228ENST00000376575 USP9YO00507 2555 aaPredicted RBP17.81■□□□□ 0.44
DDR1-228ENST00000376575 TRAPPC13A5PLN9 417 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 CPSF4LA6NMK7 179 aaKnown RBP17.8■□□□□ 0.44
DDR1-228ENST00000376575 HSPB2A8KAH6 182 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 CHP2O43745 196 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 GMNNO75496 209 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 PDE5AO76074 875 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 IL2RAP01589 272 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 CCNA2P20248 432 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 CDSNQ15517 529 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 HSPB2Q16082 182 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 IQCCQ4KMZ1 466 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 LCN8Q6JVE9 175 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 WDR88Q6ZMY6 472 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 MRGPRGQ86SM5 289 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 FAM86B1Q8N7N1 296 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 RNF128Q8TEB7 428 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 ASB9Q96DX5 294 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 C7orf34Q96L11 122 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 NSMCE2Q96MF7 247 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 PRSS27Q9BQR3 290 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 PTDSS2Q9BVG9 487 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 CADM1Q9BY67 442 aaKnown RBP17.8■□□□□ 0.44
DDR1-228ENST00000376575 ZNF629Q9UEG4 869 aaPredicted RBP17.8■□□□□ 0.44
DDR1-228ENST00000376575 MCTS1Q9ULC4 181 aaKnown RBP17.8■□□□□ 0.44
DDR1-228ENST00000376575 A4GNTQ9UNA3 340 aa17.8■□□□□ 0.44
DDR1-228ENST00000376575 SPTAN1Q13813 2472 aaKnown RBP17.8■□□□□ 0.44
DDR1-228ENST00000376575 DOPEY2Q9Y3R5 2298 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 ELOA3DA6NLF2 546 aaPredicted RBP17.79■□□□□ 0.44
DDR1-228ENST00000376575 FTCDNL1E5RQL4 147 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 ACOT8O14734 319 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 GSC2O15499 205 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 DNAJC8O75937 253 aaPredicted RBP17.79■□□□□ 0.44
DDR1-228ENST00000376575 PRKD3O94806 890 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 PRSS23O95084 383 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 OR5F1O95221 314 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 IL18BPO95998 194 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 CRHP06850 196 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 TFPIP10646 304 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 THRBP10828 461 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 FCGR2AP12318 317 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 ATP6V1B2P21281 511 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 CHRNB4P30926 498 aa17.79■□□□□ 0.44
DDR1-228ENST00000376575 RASSF2P50749 326 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms