RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FUT5Q11128 374 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 BTN1A1Q13410 526 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ZNF628Q5EBL2 1059 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SLC35F2Q8IXU6 374 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 RFLNBQ8N5W9 214 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 POMGNT2Q8NAT1 580 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SYNPRQ8TBG9 265 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 RLN3Q8WXF3 142 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ACOT12Q8WYK0 555 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SLC22A18Q96BI1 424 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SGTBQ96EQ0 304 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 RANBP3Q9H6Z4 567 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 Q9N2J8 555 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SLC6A5Q9Y345 797 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MAB21L2Q9Y586 359 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 IGKV1-8A0A0C4DH67 115 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 DCDC2BA2VCK2 349 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 HCRTR2O43614 444 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 LILRB5O75023 590 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TBX6O95947 436 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PLATP00750 562 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SPARCP09486 303 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 VAMP1P23763 118 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CCKBRP32239 447 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ZAR1Q86SH2 424 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 FOXRED2Q8IWF2 684 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MOAP1Q96BY2 351 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 UBQLN2Q9UHD9 624 aa13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PRSS38A1L453 326 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ITGA10O75578 1167 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TFPIP10646 304 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PSMD4P55036 377 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 P2RX3P56373 397 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PPP2CBP62714 309 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PPP2CAP67775 309 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CCDC157Q569K6 752 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TMEM91Q6ZNR0 172 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ZNF767PQ75MW2 155 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GALNTL5Q7Z4T8 443 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 NAXEQ8NCW5 288 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 LSM14AQ8ND56 463 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 OR2L8Q8NGY9 312 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 DGAT2Q96PD7 388 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ACTR10Q9NZ32 417 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 KLHL21Q9UJP4 597 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ARHGEF17Q96PE2 2063 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 A0A1W2PPV9 198 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CLDN4O14493 209 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 AGR2O95994 175 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CISD3P0C7P0 127 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ATF1P18846 271 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GPR18Q14330 331 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 DECR1Q16698 335 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PCGF3Q3KNV8 242 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 KDM8Q8N371 416 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MS4A15Q8N5U1 240 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ZFYVE21Q9BQ24 234 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TESQ9UGI8 421 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PLEKHA6Q9Y2H5 1048 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SCN8AQ9UQD0 1980 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 KRT33AO76009 404 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ZNF250P15622 560 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PRKACBP22694 351 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 RPS15AP62244 130 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SKP1P63208 163 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 AADACL4Q5VUY2 407 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SSX6Q7RTT6 188 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 LRRC56Q8IYG6 542 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PIGUQ9H490 435 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 FGF20Q9NP95 211 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GVINP1Q7Z2Y8 2422 aa13.29□□□□□ -0.28
TNFRSF1B-201ENST00000376259 P2RX6O15547 441 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SCO2O43819 266 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 C4BPBP20851 252 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CLDN20P56880 219 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TEKQ02763 1124 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ELP2Q6IA86 826 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 LRFN4Q6PJG9 635 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TTLL10Q6ZVT0 673 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GAL3ST3Q96A11 431 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 NXPE2Q96DL1 559 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 WASH6PQ9NQA3 447 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 A0A1B0GVI7 797 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CTSVO60911 334 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 NDUFB2O95178 105 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CEACAM5P06731 702 aa13.28□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MAP3K8P41279 467 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms