RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 MAPK3P27361 379 aaPredicted RBP16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 TRAM2Q15035 370 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 SMAD2Q15796 467 aaKnown RBP16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 TCEAL8Q8IYN2 117 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 CMTM4Q8IZR5 234 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 C12orf45Q8N5I9 185 aaPredicted RBP16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 TEX19Q8NA77 164 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 PFN4Q8NHR9 129 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 UBE2E3Q969T4 207 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 NXPE3Q969Y0 559 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 C4orf36Q96KX1 117 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 MRGPRX3Q96LB0 322 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 AIF1LQ9BQI0 150 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 SLC38A1Q9H2H9 487 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 UBQLN3Q9H347 655 aa16.61■□□□□ 0.25
TUBGCP3-202ENST00000375669 KHDRBS3O75525 346 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 STX11O75558 287 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 EIF3GO75821 320 aaKnown RBP eCLIP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 LRG1P02750 347 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 MT-ND5P03915 603 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 PRG2P13727 222 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 FNTBP49356 437 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 PDX1P52945 283 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 GMFBP60983 142 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SNRPNP63162 240 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 TGM3Q08188 693 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 OR7E24Q6IFN5 339 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 HEPHL1Q6MZM0 1159 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SFTPA1Q8IWL2 248 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 PUSL1Q8N0Z8 303 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 ARL14Q8N4G2 192 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SUN3Q8TAQ9 357 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 MCHR1Q99705 422 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 UTP23Q9BRU9 249 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 LGR4Q9BXB1 951 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 PITHD1Q9GZP4 211 aaPredicted RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 RASL12Q9NYN1 266 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 A0A0G2JPF8 293 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 HNRNPCL3B7ZW38 293 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SPINT1O43278 529 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 NARSO43776 548 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 HNRNPCL4P0DMR1 293 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 ZNF35P13682 527 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 PYCR1P32322 319 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 KCNJ3P48549 501 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SLC7A9P82251 487 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 UBE2NLQ5JXB2 153 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 FAM74A1Q5RGS3 127 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 OR4C11Q6IEV9 310 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 DPPA4Q7L190 304 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SSX6Q7RTT6 188 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 GDF7Q7Z4P5 450 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 OR2T33Q8NG76 320 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 ZNF671Q8TAW3 534 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 IRF7Q92985 503 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 RAD51AP1Q96B01 352 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 DTD2Q96FN9 168 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 OR7D2Q96RA2 312 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 CMSS1Q9BQ75 279 aaKnown RBP16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 MFFQ9GZY8 342 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 GAREM1Q9H706 876 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 SAGE1Q9NXZ1 904 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 KLK11Q9UBX7 282 aa16.6■□□□□ 0.25
TUBGCP3-202ENST00000375669 A0A1W2PR48 441 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 GABARAPH6UMI1 98 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 ERI3O43414 337 aaKnown RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 SGCEO43556 437 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 KRT33AO76009 404 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 ACAA1P09110 424 aaPredicted RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 MAT2AP31153 395 aaKnown RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 TAS2R38P59533 333 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 TNFRSF17Q02223 184 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 C2orf68Q2NKX9 166 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 FAM46CQ5VWP2 391 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 ZNF620Q6ZNG0 422 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 TMPRSS9Q7Z410 1059 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 TMIEQ8NEW7 156 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 OR5J2Q8NH18 312 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 LGALS14Q8TCE9 139 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 NDC1Q9BTX1 674 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 SYNPO2LQ9H987 977 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 GSN-AS1Q9NRJ2 163 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 KLHL9Q9P2J3 617 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 AK6Q9Y3D8 172 aaKnown RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 NPIPA5A0A0B4J1W7 369 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 TRAV1-2A0A0B4J238 106 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 NPIPA7E9PJI5 369 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 F5H5P2 479 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 SSX5O60225 188 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 NPIPA8P0DM63 369 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 ITGB8P26012 769 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 FRKP42685 505 aaPredicted RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 MECP2P51608 486 aaKnown RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 ST3GAL3Q11203 375 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 CBLN2Q8IUK8 224 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 LINC01555Q8NAE3 123 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 PBX4Q9BYU1 374 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 GPN3Q9UHW5 284 aaPredicted RBP16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 PLEKHM1Q9Y4G2 1056 aa16.59■□□□□ 0.25
TUBGCP3-202ENST00000375669 SPTBN5Q9NRC6 3674 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms