RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PRKYO43930 277 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 SRSF5Q13243 272 aaKnown RBP16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 CAMK2DQ13557 499 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 FGL2Q14314 439 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 DPY19L4Q7Z388 723 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 Q96M85 177 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 PRDM7Q9NQW5 492 aa16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 NOP16Q9Y3C1 178 aaKnown RBP16.61■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC16A6O15403 523 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 KIR2DL1P43626 348 aaPredicted RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 DAP3P51398 398 aaKnown RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 SFRP4Q6FHJ7 346 aaPredicted RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 IQCF2Q8IXL9 164 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 SIRT6Q8N6T7 355 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 OR2A14Q96R47 310 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 VSX1Q9NZR4 365 aaPredicted RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 PSORS1C1Q9UIG5 152 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 POMT2Q9UKY4 750 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 PCDHGA10Q9Y5H3 936 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 MTCH2Q9Y6C9 303 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 C13orf42A0A1B0GVH6 325 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC19A2O60779 497 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 POU3F2P20265 443 aaPredicted RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 MAP2K3P46734 347 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 MELKQ14680 651 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 TIGD4Q8IY51 512 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 CLEC2DQ9UHP7 191 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 SH3BGRL2Q9UJC5 107 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 KCNE3Q9Y6H6 103 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 TMED7-TICAM2A0A0A6YYA0 188 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 CSNK1A1P48729 337 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 FOXK2Q01167 660 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 PRKCDQ05655 676 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 C17orf67Q0P5P2 114 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 HMGCLL1Q8TB92 370 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 TRMT10AQ8TBZ6 339 aaKnown RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC2A12Q8TD20 617 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF385DQ9H6B1 395 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 FBXL3Q9UKT7 428 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 TMED7Q9Y3B3 224 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 GJE1A6NN92 205 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 ARHGAP33O14559 1287 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 KCNK2O95069 426 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 DRD5P21918 477 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 GPR85P60893 370 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 ADARB1P78563 741 aaKnown RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 GLYR1Q49A26 553 aaPredicted RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 KCTD9Q7L273 389 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 GPR148Q8TDV2 347 aa16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 TTYH1Q9H313 450 aaPredicted RBP16.6■□□□□ 0.25
PTPDC1-202ENST00000375360 TTC28Q96AY4 2481 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 TRAV18A0A075B6X5 111 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 TEX13DA0A0J9YY54 714 aaPredicted RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 TMX2-CTNND1H3BSU7 103 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 PIAS2O75928 621 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 CD79AP11912 226 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 DPP4P27487 766 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 NKG7Q16617 165 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 HLA-BQ31612 363 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 RADILQ96JH8 1075 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 METTL8Q9H825 291 aaKnown RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 HHATLQ9HCP6 504 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC7A11Q9UPY5 501 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ADAM23O75077 832 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 MAN2A2P49641 1150 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ISL1P61371 349 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ATXN7L3Q14CW9 347 aaPredicted RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 UCN3Q969E3 161 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ALG12Q9BV10 488 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF160Q9HCG1 818 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 TCRBV5S2A0A599 114 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 GATBO75879 557 aaKnown RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 TMEM225BP0DP42 221 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 RPS19BP1Q86WX3 136 aaKnown RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 MSRB3Q8IXL7 192 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 MINDY2Q8NBR6 621 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 SMRP1Q8NCR6 262 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 COX14Q96I36 57 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ZNF582Q96NG8 517 aaPredicted RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 CDX2Q99626 313 aaPredicted RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 GABRG3Q99928 467 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 NXF5Q9H1B4 397 aaKnown RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ELOVL3Q9HB03 270 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 NUFIP1Q9UHK0 495 aaKnown RBP16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 PCDHGA6Q9Y5G7 932 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 NPFFR2Q9Y5X5 522 aa16.59■□□□□ 0.25
PTPDC1-202ENST00000375360 ACSM5Q6NUN0 579 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 GDPGP1Q6ZNW5 385 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 SMOC1Q9H4F8 434 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 PARP14Q460N5 1801 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 A6NIZ1 184 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 CENPBD1B2RD01 187 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 GREM1O60565 184 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 SLC1A3P43003 542 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 HTR3AP46098 478 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 SSR4P51571 173 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 RAB15P59190 212 aa16.58■□□□□ 0.25
PTPDC1-202ENST00000375360 RAP1BP61224 184 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms