RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GALNT6Q8NCL4 622 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 CLDN16Q9Y5I7 305 aa11.1□□□□□ -0.63
HMGCL-202ENST00000374487 LY6G6EA0A0G2JKS1 128 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CD8B2A6NJW9 211 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 TTC36A6NLP5 189 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 NPIPB9F8W1W9 429 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SNPHO15079 494 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 FLRT2O43155 660 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 DYRK3O43781 588 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 OR2B3O76000 313 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 MRPL3P09001 348 aaKnown RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CD8BP10966 210 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CEACAM1P13688 526 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SPNP16150 400 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 GRK6P43250 576 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 EIF2B2P49770 351 aaKnown RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CAV3P56539 151 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CD300CQ08708 224 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 DBPQ10586 325 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 BIKQ13323 160 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 GALEQ14376 348 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 NDUFAF6Q330K2 333 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ZMAT1Q5H9K5 638 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ARHGAP11AQ6P4F7 1023 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 GDPD3Q7L5L3 318 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 C17orf82Q86X59 251 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ARIH2OSQ8N7S6 290 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF615Q8N8J6 731 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 EFHD2Q96C19 240 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ITPKCQ96DU7 683 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ERMAPQ96PL5 475 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 TRIM36Q9NQ86 728 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 TIGARQ9NQ88 270 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 PNO1Q9NRX1 252 aaKnown RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ASB6Q9NWX5 421 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 PCDHGB2Q9Y5G2 931 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 U3KQA8 63 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 MN1Q10571 1320 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 PCNX2A6NKB5 2137 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 TMCC2O75069 709 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 MT-ND5P03915 603 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CLUP10909 449 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SDHBP21912 280 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 BDH1Q02338 343 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 GPR50Q13585 617 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ZNF362Q5T0B9 420 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SLC43A2Q8N370 569 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SDR16C5Q8N3Y7 309 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 FAM98AQ8NCA5 519 aaKnown RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 DNAJA4Q8WW22 397 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SGTBQ96EQ0 304 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 SENP5Q96HI0 755 aaPredicted RBP11.09□□□□□ -0.63
HMGCL-202ENST00000374487 NDC1Q9BTX1 674 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 KCNN2Q9H2S1 579 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 MCCC2Q9HCC0 563 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 INPP5EQ9NRR6 644 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 CUTCQ9NTM9 273 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 COMMD3Q9UBI1 195 aa11.09□□□□□ -0.63
HMGCL-202ENST00000374487 ARID1BQ8NFD5 2236 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-202ENST00000374487 C2orf92A0A1B0GVN3 265 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 FITM1A5D6W6 292 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 TMEM150CB9EJG8 249 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 RNF13O43567 381 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 PRKNO60260 465 aaPredicted RBP11.08□□□□□ -0.64
HMGCL-202ENST00000374487 NDUFB2O95178 105 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 GYPBP06028 91 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 FTH1P19P0C7X4 201 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 GALNSP34059 522 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 RPL4P36578 427 aaKnown RBP11.08□□□□□ -0.64
HMGCL-202ENST00000374487 FOXC1Q12948 553 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 INSL4Q14641 139 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF79Q15937 498 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.08□□□□□ -0.64
HMGCL-202ENST00000374487 SNAP47Q5SQN1 464 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 OGFOD3Q6PK18 319 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 LINC00114Q6XXX2 140 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 MED25Q71SY5 747 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 ZNF527Q8NB42 609 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 OR7G1Q8NGA0 311 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 OR52E2Q8NGJ4 325 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 OR5W2Q8NH69 310 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 SETD6Q8TBK2 473 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 DCLRE1CQ96SD1 692 aaKnown RBP11.08□□□□□ -0.64
HMGCL-202ENST00000374487 CHRNA10Q9GZZ6 450 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 RAB33BQ9H082 229 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 MIXL1Q9H2W2 232 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 POLHQ9Y253 713 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 CLCA3PQ9Y6N3 262 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 RNF215Q9Y6U7 377 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
HMGCL-202ENST00000374487 NCOR2Q9Y618 2525 aa11.07□□□□□ -0.64
HMGCL-202ENST00000374487 A0A087WUJ7 227 aa11.07□□□□□ -0.64
HMGCL-202ENST00000374487 CCDC182A6NF36 153 aa11.07□□□□□ -0.64
HMGCL-202ENST00000374487 A8MUA0 341 aa11.07□□□□□ -0.64
HMGCL-202ENST00000374487 POLR1CO15160 346 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-202ENST00000374487 HYAL3O43820 417 aaPredicted RBP11.07□□□□□ -0.64
HMGCL-202ENST00000374487 PPM1BO75688 479 aa11.07□□□□□ -0.64
HMGCL-202ENST00000374487 RGS9O75916 674 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms