RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GLCEO94923 617 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CDRT1O95170 752 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 UTS2O95399 124 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CER1O95813 267 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 DDAH2O95865 285 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 IGKV1D-16P01601 117 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CLPSP04118 112 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 HNRNPCP07910 306 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ASAH2BP0C7U1 165 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TRAPPC2P0DI81 140 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TRAPPC2BP0DI82 140 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 FOSL2P15408 326 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CELP19835 753 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 MAOAP21397 527 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 FUT4P22083 530 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 NR4A1P22736 598 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 MYL9P24844 172 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CXCR1P25024 350 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 SDHAP31040 664 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TNFSF8P32971 234 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TALDO1P37837 337 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 SOX3P41225 446 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 APOBEC1P41238 236 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 NR4A2P43354 598 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 RPS5P46782 204 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CD97P48960 835 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 P2RX1P51575 399 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PGDP52209 483 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 GFERP55789 205 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PPP1CAP62136 330 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 BTG2P78543 158 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 DCDP81605 110 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 EBPQ15125 230 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 DEFB110Q30KQ9 67 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 CDONQ4KMG0 1287 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PMS2CLQ68D20 193 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TMEM81Q6P7N7 255 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 KIRREL2Q6UWL6 708 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 VASH1Q7L8A9 365 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 MAMDC2Q7Z304 686 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 GRINAQ7Z429 371 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 HDDC2Q7Z4H3 204 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC35F3Q8IY50 421 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC25A45Q8N413 288 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF614Q8N883 585 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF441Q8N8Z8 693 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ATP6V1C2Q8NEY4 427 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 OR2T4Q8NH00 348 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 OR4C3Q8NH37 302 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 OR1L3Q8NH93 324 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 NEIL3Q8TAT5 605 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 GATAD2BQ8WXI9 593 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ASB17Q8WXJ9 295 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 EDAQ92838 391 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ERMAPQ96PL5 475 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TNFRSF13CQ96RJ3 184 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 TBL1XR1Q9BZK7 514 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 NMNAT2Q9BZQ4 307 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ZCCHC4Q9H5U6 513 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 MCCC2Q9HCC0 563 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PRMT8Q9NR22 394 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF275Q9NSD4 429 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 C20orf141Q9NUB4 165 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 AKAP7Q9P0M2 348 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 ABRACLQ9P1F3 81 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 PISDQ9UG56 409 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 RARRES3Q9UL19 164 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC6A14Q9UN76 642 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 GPR52Q9Y2T5 361 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 MYO9BQ13459 2157 aa7.98□□□□□ -1.13
SNRNP40-202ENST00000373720 A0A1B0GVG6 124 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 FABP12A6NFH5 140 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 A8MVM7 634 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 TMX2-CTNND1H3BSU7 103 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 TGFBR3LH3BV60 316 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ETV2O00321 342 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 TERTO14746 1132 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 RGS5O15539 181 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF208O43345 1280 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 NDUFB5O43674 189 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SC5DO75845 299 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SNAPC5O75971 98 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 RENP00797 406 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 IGHEP01854 428 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 RAF1P04049 648 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 GP1BAP07359 652 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SYPP08247 313 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF883P0CG24 379 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 GP1BBP13224 206 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 RPL4P36578 427 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 POLR2HP52434 150 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 CAPZA1P52907 286 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 OR1D5P58170 312 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 FXYD6P3P58550 94 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 RPS7P62081 194 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PITPNAQ00169 270 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 HOXC5Q00444 222 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 EGR3Q06889 387 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 PLCXD2Q0VAA5 305 aa7.97□□□□□ -1.13
SNRNP40-202ENST00000373720 SNTA1Q13424 505 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms