RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 FAM98AQ8NCA5 519 aaKnown RBP13.66□□□□□ -0.22
COL9A2-202ENST00000372748 OR52H1Q8NGJ2 320 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 OR2A1Q8NGT9 310 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 KRCC1Q9NPI7 259 aaPredicted RBP13.66□□□□□ -0.22
COL9A2-202ENST00000372748 CES1P1Q9UKY3 287 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 PCDHGA9Q9Y5G4 932 aaKnown RBP13.66□□□□□ -0.22
COL9A2-202ENST00000372748 PCDHGA5Q9Y5G8 931 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 SESN1Q9Y6P5 492 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 GSTZ1O43708 216 aaPredicted RBP13.66□□□□□ -0.22
COL9A2-202ENST00000372748 ATP1B1P05026 303 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 CD53P19397 219 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 NT5EP21589 574 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 BAMBIQ13145 260 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 KRT33BQ14525 404 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF273Q14593 569 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 MELKQ14680 651 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 LINC00303Q3SY05 128 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 STPG1Q5TH74 334 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 ADAMTSL4Q6UY14 1074 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 BPIFA2Q96DR5 249 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF223Q9UK11 482 aaPredicted RBP13.66□□□□□ -0.22
COL9A2-202ENST00000372748 FBXL2Q9UKC9 423 aa13.66□□□□□ -0.22
COL9A2-202ENST00000372748 ACOD1A6NK06 481 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 RIIAD1A6NNX1 92 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 MCRIP1C9JLW8 97 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 PSMD9O00233 223 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 MAT2AP31153 395 aaKnown RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 DCTDP32321 178 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 FCRLAQ7L513 359 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 OR4C6Q8NH72 309 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 PELI1Q96FA3 418 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF578Q96N58 590 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 OR1F2PQ96R84 312 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 DMRTA2Q96SC8 542 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 PCBD2Q9H0N5 130 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 TTYH1Q9H313 450 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 INPP5EQ9NRR6 644 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 POT1Q9NUX5 634 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 NTMQ9P121 344 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 SERGEFQ9UGK8 458 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 COPS3Q9UNS2 423 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF780BQ9Y6R6 833 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 MYO9BQ13459 2157 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 TRAV1-2A0A0B4J238 106 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 TRBV2A0A0J9YWF9 115 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 A0A1B0GUH1 482 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 IFNA16P05015 189 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 DRD3P35462 400 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 UBE2MP61081 183 aaKnown RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 RPS11P62280 158 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 OR1Q1Q15612 314 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 UBE2NLQ5JXB2 153 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 GRHL3Q8TE85 626 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 MOAP1Q96BY2 351 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 SEMA4CQ9C0C4 833 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 IL23AQ9NPF7 189 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 CD93Q9NPY3 652 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 NANSQ9NR45 359 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 FBXO34Q9NWN3 711 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 CA5BQ9Y2D0 317 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 TRAPPC13A5PLN9 417 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ANXA2P2A6NMY6 339 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 SUSD5O60279 629 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 FMO6PO60774 539 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ARL6IP5O75915 188 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ASGR2P07307 311 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 HNRNPA1P09651 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 GLULP15104 373 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ERVK-21P61565 698 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 RPS15P62841 145 aaKnown RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 HLXQ14774 488 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 DUSP5Q16690 384 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 FAM69AQ5T7M9 428 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 FAM199XQ6PEV8 388 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 GLDNQ6ZMI3 551 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ASPGQ86U10 573 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 ZNF681Q96N22 645 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 MTHFD2LQ9H903 347 aaPredicted RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 CACYBPQ9HB71 228 aaKnown RBP13.65□□□□□ -0.22
COL9A2-202ENST00000372748 NOX4Q9NPH5 578 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 GNG8Q9UK08 70 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 SIGLEC7Q9Y286 467 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 SLC35A3Q9Y2D2 325 aa13.65□□□□□ -0.22
COL9A2-202ENST00000372748 MDC1Q14676 2089 aaKnown RBP13.64□□□□□ -0.23
COL9A2-202ENST00000372748 SCN2AQ99250 2005 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 PEX12O00623 359 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 NARSO43776 548 aaKnown RBP13.64□□□□□ -0.23
COL9A2-202ENST00000372748 MAZP56270 477 aaKnown RBP13.64□□□□□ -0.23
COL9A2-202ENST00000372748 CDK5R1Q15078 307 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
COL9A2-202ENST00000372748 MFSD12Q6NUT3 480 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 UBE2Q1Q7Z7E8 422 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 RANBP3LQ86VV4 465 aaPredicted RBP13.64□□□□□ -0.23
COL9A2-202ENST00000372748 SLC25A38Q96DW6 304 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 SMIM19Q96E16 107 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 ARL6Q9H0F7 186 aa13.64□□□□□ -0.23
COL9A2-202ENST00000372748 FKRPQ9H9S5 495 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms