RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 GBX2P52951 348 aaPredicted RBP15.1■□□□□ 0.01
SDC4-201ENST00000372733 CLDN12P56749 244 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 OPCMLQ14982 345 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 FAM199XQ6PEV8 388 aaPredicted RBP15.1■□□□□ 0.01
SDC4-201ENST00000372733 ZNF614Q8N883 585 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 WDR89Q96FK6 387 aaPredicted RBP15.1■□□□□ 0.01
SDC4-201ENST00000372733 NOX4Q9NPH5 578 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 NRIP3Q9NQ35 241 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 ANKRD10Q9NXR5 420 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 HAO2Q9NYQ3 351 aa15.1■□□□□ 0.01
SDC4-201ENST00000372733 ACOD1A6NK06 481 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 ATP1B1P05026 303 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 NGFRP08138 427 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 ACSM4P0C7M7 580 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 PSMB1P20618 241 aaKnown RBP15.09■□□□□ 0.01
SDC4-201ENST00000372733 SIRPAP78324 504 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 ADGRG3Q86Y34 549 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 TMEFF1Q8IYR6 380 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 OR4E2Q8NGC2 313 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 SLC2A12Q8TD20 617 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 PTCHD1Q96NR3 888 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 IL21RQ9HBE5 538 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 PHPT1Q9NRX4 125 aaPredicted RBP15.09■□□□□ 0.01
SDC4-201ENST00000372733 FLRT3Q9NZU0 649 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 KLK11Q9UBX7 282 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 LRRC72A6NJI9 287 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 P2RX6O15547 441 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 TGM6O95932 706 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 CPMP14384 443 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 CXCL2P19875 107 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 RUNX2Q13950 521 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 STPG1Q5TH74 334 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 GPAT4Q86UL3 456 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 PAQR7Q86WK9 346 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 ZNF433Q8N7K0 673 aaPredicted RBP15.09■□□□□ 0.01
SDC4-201ENST00000372733 CNOT9Q92600 299 aaKnown RBP15.09■□□□□ 0.01
SDC4-201ENST00000372733 WBP1Q96G27 269 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 CNN2Q99439 309 aaKnown RBP15.09■□□□□ 0.01
SDC4-201ENST00000372733 TIMM29Q9BSF4 260 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
SDC4-201ENST00000372733 PIPOXQ9P0Z9 390 aa15.09■□□□□ 0.01
SDC4-201ENST00000372733 GXYLT2A0PJZ3 443 aa15.08■□□□□ 0
SDC4-201ENST00000372733 GNB5O14775 395 aa15.08■□□□□ 0
SDC4-201ENST00000372733 PIN1P1O15428 100 aa15.08■□□□□ 0
SDC4-201ENST00000372733 CEACAM5P06731 702 aa15.08■□□□□ 0
SDC4-201ENST00000372733 HIST1H1CP16403 213 aaKnown RBP15.08■□□□□ 0
SDC4-201ENST00000372733 MAT2AP31153 395 aaKnown RBP15.08■□□□□ 0
SDC4-201ENST00000372733 POU4F2Q12837 409 aa15.08■□□□□ 0
SDC4-201ENST00000372733 EXOSC7Q15024 291 aaKnown RBP15.08■□□□□ 0
SDC4-201ENST00000372733 FAM69AQ5T7M9 428 aa15.08■□□□□ 0
SDC4-201ENST00000372733 ARHGAP11AQ6P4F7 1023 aa15.08■□□□□ 0
SDC4-201ENST00000372733 APOOLQ6UXV4 268 aa15.08■□□□□ 0
SDC4-201ENST00000372733 OVCH1Q7RTY7 1134 aa15.08■□□□□ 0
SDC4-201ENST00000372733 HDDC2Q7Z4H3 204 aa15.08■□□□□ 0
SDC4-201ENST00000372733 SNX33Q8WV41 574 aa15.08■□□□□ 0
SDC4-201ENST00000372733 ZNRF4Q8WWF5 429 aa15.08■□□□□ 0
SDC4-201ENST00000372733 SFXN2Q96NB2 322 aa15.08■□□□□ 0
SDC4-201ENST00000372733 CAPN10Q9HC96 672 aa15.08■□□□□ 0
SDC4-201ENST00000372733 EMC3Q9P0I2 261 aa15.08■□□□□ 0
SDC4-201ENST00000372733 COPS3Q9UNS2 423 aa15.08■□□□□ 0
SDC4-201ENST00000372733 PTPRSQ13332 1948 aa15.08■□□□□ 0
SDC4-201ENST00000372733 A0A1B0GUH1 482 aa15.08■□□□□ 0
SDC4-201ENST00000372733 IDSB3KWA1 339 aa15.08■□□□□ 0
SDC4-201ENST00000372733 IMPA2O14732 288 aa15.08■□□□□ 0
SDC4-201ENST00000372733 ADAM11O75078 769 aa15.08■□□□□ 0
SDC4-201ENST00000372733 LDB3O75112 727 aa15.08■□□□□ 0
SDC4-201ENST00000372733 KHDRBS3O75525 346 aaKnown RBP15.08■□□□□ 0
SDC4-201ENST00000372733 IFNGP01579 166 aa15.08■□□□□ 0
SDC4-201ENST00000372733 ATF4P18848 351 aaPredicted RBP15.08■□□□□ 0
SDC4-201ENST00000372733 SLC6A6P31641 620 aa15.08■□□□□ 0
SDC4-201ENST00000372733 FHL1Q13642 323 aa15.08■□□□□ 0
SDC4-201ENST00000372733 FHL5Q5TD97 284 aa15.08■□□□□ 0
SDC4-201ENST00000372733 METTL11BQ5VVY1 283 aa15.08■□□□□ 0
SDC4-201ENST00000372733 SLC35F2Q8IXU6 374 aa15.08■□□□□ 0
SDC4-201ENST00000372733 TOX2Q96NM4 488 aa15.08■□□□□ 0
SDC4-201ENST00000372733 NPDC1Q9NQX5 325 aaPredicted RBP15.08■□□□□ 0
SDC4-201ENST00000372733 NANSQ9NR45 359 aa15.08■□□□□ 0
SDC4-201ENST00000372733 ZNF69Q9UC07 566 aa15.08■□□□□ 0
SDC4-201ENST00000372733 C19orf53Q9UNZ5 99 aaPredicted RBP15.08■□□□□ 0
SDC4-201ENST00000372733 A0A087WV48 116 aa15.07■□□□□ 0
SDC4-201ENST00000372733 A0A1B0GWA3 101 aa15.07■□□□□ 0
SDC4-201ENST00000372733 hCG_1807616A0A1W2PRN6 198 aa15.07■□□□□ 0
SDC4-201ENST00000372733 PSMD9O00233 223 aa15.07■□□□□ 0
SDC4-201ENST00000372733 SELENOFO60613 162 aa15.07■□□□□ 0
SDC4-201ENST00000372733 PRAF2O60831 178 aa15.07■□□□□ 0
SDC4-201ENST00000372733 TYRP1P17643 537 aa15.07■□□□□ 0
SDC4-201ENST00000372733 ANXA7P20073 488 aaKnown RBP15.07■□□□□ 0
SDC4-201ENST00000372733 MAP2K6P52564 334 aa15.07■□□□□ 0
SDC4-201ENST00000372733 EPHA4P54764 986 aa15.07■□□□□ 0
SDC4-201ENST00000372733 ACTA2P62736 377 aa15.07■□□□□ 0
SDC4-201ENST00000372733 ACTG2P63267 376 aa15.07■□□□□ 0
SDC4-201ENST00000372733 FCRLAQ7L513 359 aa15.07■□□□□ 0
SDC4-201ENST00000372733 PRSS42Q7Z5A4 293 aa15.07■□□□□ 0
SDC4-201ENST00000372733 UXS1Q8NBZ7 420 aa15.07■□□□□ 0
SDC4-201ENST00000372733 LINC00052Q96N35 136 aa15.07■□□□□ 0
SDC4-201ENST00000372733 PLEKHA1Q9HB21 404 aa15.07■□□□□ 0
SDC4-201ENST00000372733 A0A0B4J2E0 115 aa15.07■□□□□ 0
SDC4-201ENST00000372733 A0A1B0GX12 115 aa15.07■□□□□ 0
SDC4-201ENST00000372733 GPR89AB7ZAQ6 455 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms