RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ALG11Q2TAA5 492 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 PLK5Q496M5 336 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 LYPLAL1Q5VWZ2 237 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 GTF2H2CQ6P1K8 395 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 LYPD4Q6UWN0 246 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 PRSS35Q8N3Z0 413 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 SYT14Q8NB59 555 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 RCBTB1Q8NDN9 531 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 GNPDA2Q8TDQ7 276 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ACOT11Q8WXI4 607 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 HIST1H2BAQ96A08 127 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 LMLNQ96KR4 655 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 LYSMD1Q96S90 227 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CCNL2Q96S94 520 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ZFYVE21Q9BQ24 234 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 SLC46A2Q9BY10 475 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 GLRX2Q9NS18 164 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CLN6Q9NWW5 311 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 MGAT4CQ9UBM8 478 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CRLS1Q9UJA2 301 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 SRPK3Q9UPE1 567 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 POFUT2Q9Y2G5 429 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 PLXNA4Q9HCM2 1894 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 A0A1W2PPC1 479 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 TRAPPC13A5PLN9 417 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 NPIPB15A6NHN6 443 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 TMEM210A6NLX4 147 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 TSTD3H0UI37 97 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 MKRN2OSH3BPM6 223 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ARPC5O15511 151 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 TAPBPO15533 448 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 EIF4E2O60573 245 aaKnown RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 SCN2BO60939 215 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ZNF682O95780 498 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CTSAP10619 480 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CPN1P15169 458 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ELK1P19419 428 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 DGKAP23743 735 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 RFX3P48380 749 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 BLOC1S1P78537 153 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 BIKQ13323 160 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 C1DQ13901 141 aaKnown RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 INPP5JQ15735 1006 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 IL27RAQ6UWB1 636 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 Q6ZTK2 550 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 PRSS58Q8IYP2 241 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CMTM8Q8IZV2 173 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ZBTB2Q8N680 514 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 NKAIN3Q8N8D7 197 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 XAGE5Q8WWM1 108 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 GCDHQ92947 438 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 RAB24Q969Q5 203 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 C1GALT1C1Q96EU7 318 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CPPED1Q9BRF8 314 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 TEX12Q9BXU0 123 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ZMAT4Q9H898 229 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 CYSLTR2Q9NS75 346 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 ELOVL2Q9NXB9 296 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 KLHL9Q9P2J3 617 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 NFKBIL1Q9UBC1 381 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 FBXL3Q9UKT7 428 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 GSTK1Q9Y2Q3 226 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 SF3B6Q9Y3B4 125 aaKnown RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 TMEM184BQ9Y519 407 aaPredicted RBP8.19□□□□□ -1.1
ATG4A-203ENST00000372232 OARD1Q9Y530 152 aa8.19□□□□□ -1.1
ATG4A-203ENST00000372232 H7C1Q1 480 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 RGS9O75916 674 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 C8AP07357 584 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 MTNR1BP49286 362 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 HTR6P50406 440 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 SNRPD1P62314 119 aaKnown RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 NAE1Q13564 534 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 MELKQ14680 651 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 TRAM1Q15629 374 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CT83Q5H943 113 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 RABEPKQ7Z6M1 372 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 OR4Q3Q8NH05 313 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ST7LQ8TDW4 575 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 ECHDC3Q96DC8 303 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 BSCL2Q96G97 398 aaPredicted RBP8.18□□□□□ -1.1
ATG4A-203ENST00000372232 OR4K3Q96R72 315 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 FEVQ99581 238 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 SEC11CQ9BY50 192 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CHST5Q9GZS9 411 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 TLNRD1Q9H1K6 362 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 SIRT7Q9NRC8 400 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 HS3ST2Q9Y278 367 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 PPIL1Q9Y3C6 166 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 A0A1B0GUH1 482 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 TMEM72A0PK05 275 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 M0R129 80 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 WNT9AO14904 365 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 CASKO14936 926 aa8.18□□□□□ -1.1
ATG4A-203ENST00000372232 MBTPS2O43462 519 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms