RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 HOXC4P09017 264 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 BMP4P12644 408 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 JUNBP17275 347 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 MAGEA8P43361 318 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PRPS1P60891 318 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF45Q02386 682 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 CCBE1Q6UXH8 406 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF620Q6ZNG0 422 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 Q8N402 240 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 OR5M1Q8NGP8 315 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 SLC22A8Q8TCC7 542 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 STRADBQ9C0K7 418 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 SLC25A18Q9H1K4 315 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 MRPL15Q9P015 296 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 KDM4EB2RXH2 506 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF879B4DU55 563 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 CHP2O43745 196 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 OR8G3PP0DMU2 310 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 HSD11B1P28845 292 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 TNFSF8P32971 234 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ARFIP1P53367 373 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 NXPH1P58417 271 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 RPS15P62841 145 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PPP3R1P63098 170 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ACTC1P68032 377 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ACTA1P68133 377 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ADAM8P78325 824 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 MLC1Q15049 377 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ATCAYQ86WG3 371 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 TMPRSS12Q86WS5 348 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 SERPINA12Q8IW75 414 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 MCEMP1Q8IX19 187 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 RNF113BQ8IZP6 322 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 OR1L3Q8NH93 324 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF681Q96N22 645 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 OR11A1Q9GZK7 315 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PCOLCE2Q9UKZ9 415 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 SLC6A5Q9Y345 797 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PCDHGB6Q9Y5F9 930 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 A0A087WV62 115 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 BRINP1O60477 761 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ZFAND5O76080 213 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ATP1B1P05026 303 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 THBS1P07996 1170 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ERGP11308 486 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 CCNOP22674 350 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 TAS2R43P59537 309 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 UBE2IP63279 158 aaKnown RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 CCL7P80098 99 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PLGLB1Q02325 96 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 POU3F1Q03052 451 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 MLLT11Q13015 90 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PRICKLE4Q2TBC4 344 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 GLYR1Q49A26 553 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ACSM3Q53FZ2 586 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 HES5Q5TA89 166 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 EEF1A1P5Q5VTE0 462 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 DPY19L4Q7Z388 723 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 OR6Q1Q8NGQ2 317 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 OR14A16Q8NHC5 309 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 WDR77Q9BQA1 342 aaPredicted RBP6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ENAMQ9NRM1 1142 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 HPF1Q9NWY4 346 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF337Q9Y3M9 751 aa6.56□□□□□ -1.36
TGFBR3-202ENST00000370399 PRAMEF27A3QJZ7 478 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 LILRA5A6NI73 299 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 TBX19O60806 448 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 ICOSLGO75144 302 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 TBX6O95947 436 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 PI4KAP42356 2102 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 MELKQ14680 651 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF628Q5EBL2 1059 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF613Q6PF04 617 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 DNM1P34Q6PK57 102 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 DHRS4L2Q6PKH6 230 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF627Q7L945 461 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 SLC35F2Q8IXU6 374 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CADM4Q8NFZ8 388 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 PITX2Q99697 317 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 LMF2Q9BU23 707 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CORINQ9Y5Q5 1042 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 TRAV6A0A075B6T7 132 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 PRAMEF25A6NGN4 478 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CDC42EP2O14613 210 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 EEF1E1O43324 174 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 MRPS14O60783 128 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 NOS1APO75052 506 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CER1O95813 267 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CBX7O95931 251 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 DHFRP00374 187 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 PDGFBP01127 241 aaPredicted RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 ZNF24P17028 368 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 ITGA3P26006 1051 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 SOX18P35713 384 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 RPS19P39019 145 aaKnown RBP6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CD97P48960 835 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CLRN1P58418 232 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 CD83Q01151 205 aa6.55□□□□□ -1.36
TGFBR3-202ENST00000370399 RHAGQ02094 409 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms