RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ATP1B3P54709 279 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 RPP30P78346 268 aaKnown RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 KCNJ10P78508 379 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 LEXMQ3ZCV2 418 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 C6orf15Q6UXA7 325 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 OR5AS1Q8N127 324 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 PAPD5Q8NDF8 572 aaKnown RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 WFDC5Q8TCV5 224 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 STK35Q8TDR2 534 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF597Q96LX8 424 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF300Q96RE9 604 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 CSNK1G1Q9HCP0 422 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 APMAPQ9HDC9 416 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ATP13A2Q9NQ11 1180 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 PRDM9Q9NQV7 894 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 SRPX2O60687 465 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 MT-ND4P03905 459 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ATXN1LP0C7T5 689 aaKnown RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 RRAS2P62070 204 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 MS4A2Q01362 244 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 SEMA3BQ13214 749 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ZNF684Q5T5D7 378 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ALKAL1Q6UXT8 129 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 OLIG3Q7RTU3 272 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 PRICKLE2Q7Z3G6 844 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 TMEM178AQ8NBL3 297 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 HIPK2Q9H2X6 1198 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 SPHK1Q9NYA1 384 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 KCND3Q9UK17 655 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 MRPS2Q9Y399 296 aaKnown RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 GALR3O60755 368 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 ARHGEF15O94989 841 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 NUDT7P0C024 238 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 HOXA1P49639 335 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 GSCP56915 257 aaPredicted RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 PAN3Q58A45 887 aaKnown RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 AGAP7PQ5VUJ5 663 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 AGAP6Q5VW22 663 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 CPZQ66K79 652 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 TMEM71Q6P5X7 295 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 CNIH2Q6PI25 160 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 AGAP4Q96P64 663 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 MMP28Q9H239 520 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 HSFX1Q9UBD0 423 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 USP3Q9Y6I4 520 aa7.96□□□□□ -1.14
ABCA4-201ENST00000370225 MYO18AQ92614 2054 aaKnown RBP7.96□□□□□ -1.14
ABCA4-201ENST00000370225 TSFMP43897 325 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 MTCP1P56278 107 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 RACK1P63244 317 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 S100A12P80511 92 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 EDDM3AQ14507 147 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PAQR9Q6ZVX9 377 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 RTL10Q7L3V2 364 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 CHDHQ8NE62 594 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TAAR8Q969N4 342 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 NTMT1Q9BV86 223 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PPIL3Q9H2H8 161 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 LAMB4A4D0S4 1761 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 RGPD1P0DJD0 1748 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TRBV4-1A0A0J9YWV2 114 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TOR1AO14656 332 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 B4GAT1O43505 415 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 CSNK1DP48730 415 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 CYB561P49447 251 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 HSD17B7P56937 341 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLC5A12Q1EHB4 618 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLC22A10Q63ZE4 541 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 HEPHL1Q6MZM0 1159 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PATE1Q8WXA2 126 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 RTP4Q96DX8 246 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLC41A2Q96JW4 573 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLC30A3Q99726 388 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 HDAC8Q9BY41 377 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 NDUFAF4Q9P032 175 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLC6A5Q9Y345 797 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PRKYO43930 277 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 OR7C1O76099 320 aaPredicted RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 RPS17P08708 135 aaKnown RBP7.95□□□□□ -1.14
ABCA4-201ENST00000370225 IL7P13232 177 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 GPX3P22352 226 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 NFYBP25208 207 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SSTP61278 116 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SELPLGQ14242 412 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TMEM240Q5SV17 173 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 BORAQ6PGQ7 559 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 OR1N1Q8NGS0 311 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 PIGQQ9BRB3 760 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 KATNB1Q9BVA0 655 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 GFOD1Q9NXC2 390 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 EHFQ9NZC4 300 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLAMF8Q9P0V8 285 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 BLACEA4D250 179 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 KLRC4-KLRK1H3BQV0 150 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 SLC22A5O76082 557 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 GAAP10253 952 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 HSD17B1P14061 328 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 BDKRB2P30411 391 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 TGM4P49221 684 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 MYBPHQ13203 477 aa7.95□□□□□ -1.14
ABCA4-201ENST00000370225 ELP2Q6IA86 826 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms