RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ZNF620Q6ZNG0 422 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SHISA6Q6ZSJ9 500 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ASB18Q6ZVZ8 466 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OLIG3Q7RTU3 272 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 BTLAQ7Z6A9 289 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NKAIN4Q8IVV8 208 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 JAGN1Q8N5M9 183 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OR4F15Q8NGB8 312 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OR5AK2Q8NH90 309 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CCDC74AQ96AQ1 378 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TNFRSF13CQ96RJ3 184 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 INTS14Q96SY0 518 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CSF3RQ99062 836 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ARHGDIGQ99819 225 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CTRCQ99895 268 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC19A3Q9BZV2 496 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC39A1Q9NY26 324 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TRAV36DV7A0A075B6V5 113 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 A0A1W2PPL8 197 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ANKRD34BA5PLL1 514 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CYB5AP00167 134 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 DCNP07585 359 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 UCHL1P09936 223 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF43P17038 809 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TACR3P29371 465 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ZFP36L2P47974 494 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SOX2P48431 317 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ADAM8P78325 824 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NKAIN1Q4KMZ8 207 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM205BPQ63HN1 556 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 RPL22L1Q6P5R6 122 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 PAPD4Q6PIY7 484 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 PARP16Q8N5Y8 322 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CLDN22Q8N7P3 220 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 MORN4Q8NDC4 146 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 FAM83FQ8NEG4 500 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OR51L1Q8NGJ5 315 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OR52I1Q8NGK6 324 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 UBE2FQ969M7 185 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 KCTD12Q96CX2 325 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF350Q9GZX5 532 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TCEAL2Q9H3H9 227 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 IFT46Q9NQC8 304 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 C2orf42Q9NWW7 574 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NUFIP1Q9UHK0 495 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ALOX12BO75342 701 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CRYZL1O95825 349 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 MT-ATP6P00846 226 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CD14P08571 375 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 MSX1P28360 303 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 MAP2K3P46734 347 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 FNTBP49356 437 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 GDI2P50395 445 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 GZMMP51124 257 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SNRPD2P62316 118 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TRIM61Q5EBN2 209 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC35D3Q5M8T2 416 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ANKRD34AQ69YU3 496 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 FCRLBQ6BAA4 426 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 LYSMD2Q8IV50 215 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 IL22RA1Q8N6P7 574 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NANOGP1Q8N7R0 232 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF417Q8TAU3 575 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CCDC107Q8WV48 283 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ASB17Q8WXJ9 295 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NARS2Q96I59 477 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TXNDC15Q96J42 360 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 C4orf36Q96KX1 117 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 WACQ9BTA9 647 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 KATNB1Q9BVA0 655 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 S1PR5Q9H228 398 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CHST8Q9H2A9 424 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 UCK1Q9HA47 277 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ISYNA1Q9NPH2 558 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SIRT3Q9NTG7 399 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC6A14Q9UN76 642 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 POLHQ9Y253 713 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 BOLA1Q9Y3E2 137 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NSG1A0A0A6YYJ2 146 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 CDC14CA4D256 554 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SPINT1O43278 529 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 ZNF208O43345 1280 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 GATBO75879 557 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OR7A10O76100 309 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NKX2-2O95096 273 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SYNGR4O95473 234 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 PLGP00747 810 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 HOXC12P31275 282 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OTX2P32243 289 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 FRKP42685 505 aaPredicted RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 EIF1AXP47813 144 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 GP2P55259 537 aaKnown RBP4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 GFERP55789 205 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 NXPH1P58417 271 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 SLC26A5P58743 744 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 GFOD2Q3B7J2 385 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TP53I3Q53FA7 332 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 OR2G6Q5TZ20 316 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 FCRL6Q6DN72 434 aa4.91□□□□□ -1.62
SMNDC1-202ENST00000369603 TMEM71Q6P5X7 295 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms