RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RACGAP1Q9H0H5 632 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SLC25A19Q9HC21 320 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ING3Q9NXR8 418 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 MGAT4AQ9UM21 535 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 STUB1Q9UNE7 303 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 RALGAPA1Q6GYQ0 2036 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 C17orf51A8MQB3 221 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 GTPBP1O00178 669 aaKnown RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 RAB36O95755 333 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 TRAPPC2P0DI81 140 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 TRAPPC2BP0DI82 140 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 ETV5P41161 510 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 ETV1P50549 477 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 LARS2Q15031 903 aaKnown RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 NR0B2Q15466 257 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 SYT14P1Q58G82 188 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 C16orf47Q6ZP98 133 aaPredicted RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 LANCL3Q6ZV70 420 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 OR2L13Q8N349 312 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 LSM14AQ8ND56 463 aaKnown RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 ATP6V1C2Q8NEY4 427 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 OR10Z1Q8NGY1 313 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 OR4C6Q8NH72 309 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 IFI44Q8TCB0 444 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 FAM46AQ96IP4 442 aaKnown RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 LINC00052Q96N35 136 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 PLA2G12AQ9BZM1 189 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 NLGN3Q9NZ94 848 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 MKL2Q9ULH7 1088 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 MED12Q93074 2177 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 ARPC4-TTLL3A0A0A6YYG9 625 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 MGAT2Q10469 447 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 C12orf73Q69YU5 71 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 FAM199XQ6PEV8 388 aaPredicted RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 NANOGP1Q8N7R0 232 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 SLC37A3Q8NCC5 494 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 PROKR2Q8NFJ6 384 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 OR11H4Q8NGC9 324 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 OR52I1Q8NGK6 324 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 OR52P1PQ8NH57 321 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 RNFT2Q96EX2 444 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 ZNF582Q96NG8 517 aaPredicted RBP9.81□□□□□ -0.84
TPM3-212ENST00000368533 OCIAD1Q9NX40 245 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 RDH8Q9NYR8 311 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 CYB5R1Q9UHQ9 305 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 CHST2Q9Y4C5 530 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 DSPPQ9NZW4 1301 aa9.81□□□□□ -0.84
TPM3-212ENST00000368533 A0A1W2PQL4 384 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 A0A1W2PRQ8 180 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 C17orf105B2RV13 164 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 CLDN4O14493 209 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 NSA2O95478 260 aaKnown RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 CFDP00746 253 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 PIPP12273 146 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 TRHRP34981 398 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 CRYBB2P43320 205 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 RGS8P57771 180 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 DCST2Q5T1A1 773 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 FRRS1Q6ZNA5 592 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 KIF18BQ86Y91 864 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 ZNF431Q8TF32 576 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 CCDC74BQ96LY2 380 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SLC38A2Q96QD8 506 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SAP130Q9H0E3 1048 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 CACYBPQ9HB71 228 aaKnown RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 SUSD2Q9UGT4 822 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 KCNE5Q9UJ90 142 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 TRAPPC4Q9Y296 219 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SDK2Q58EX2 2172 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 FAM240BA0A1B0GVZ2 78 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 LINC00862A6NCI5 91 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SDC2P34741 201 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SF3A2Q15428 464 aaKnown RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 CEBPEQ15744 281 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 TUSC1Q2TAM9 212 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 KLHL22Q53GT1 634 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SLC30A6Q6NXT4 461 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 OR52H1Q8NGJ2 320 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 BBS10Q8TAM1 723 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 ART5Q96L15 291 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 KLHL15Q96M94 604 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SDF2Q99470 211 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SEC22CQ9BRL7 303 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 TAPBPLQ9BX59 468 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 KLHL28Q9NXS3 571 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 COMMD3Q9UBI1 195 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 C19orf53Q9UNZ5 99 aaPredicted RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 OR10H1Q9Y4A9 318 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 PRRC2CQ9Y520 2896 aaKnown RBP9.8□□□□□ -0.84
TPM3-212ENST00000368533 A0A087WUU8 490 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 IGHV5-10-1A0A0J9YXX1 117 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 A0A1W2PRG6 482 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 LGALS8O00214 317 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 ATP1B1P05026 303 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 SP9P0CG40 484 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 GPR4P46093 362 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 COX10Q12887 443 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 MAB21L1Q13394 359 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 NSDHLQ15738 373 aa9.8□□□□□ -0.84
TPM3-212ENST00000368533 PWWP2BQ6NUJ5 590 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms