RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 GDF15Q99988 308 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 MARVELD1Q9BSK0 173 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 GPR174Q9BXC1 333 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 WSB2Q9NYS7 404 aaPredicted RBP16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 CHRNA9Q9UGM1 479 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 POMT2Q9UKY4 750 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 FAM221BA6H8Z2 402 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 FAM171A2A8MVW0 826 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 PSMD9O00233 223 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 C19orf47Q8N9M1 422 aaKnown RBP16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 THAP4Q8WY91 577 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 HOXB13Q92826 284 aaPredicted RBP16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 CLIP3Q96DZ5 547 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 LMF1Q96S06 567 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 UBL7Q96S82 380 aaPredicted RBP16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 ABCG5Q9H222 651 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 MCUBQ9NWR8 336 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 OR5K4A6NMS3 321 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 FOXS1O43638 330 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 CSTAP01040 98 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 PXKQ7Z7A4 578 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 OR4D9Q8NGE8 314 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 ZPLD1Q8TCW7 415 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 RFT1Q96AA3 541 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 MAP3K3Q99759 626 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 HAO2Q9NYQ3 351 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 BAIAP2Q9UQB8 552 aa16.62■□□□□ 0.25
UBQLN4-201ENST00000368309 FZD7O75084 574 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 NDUFB2O95178 105 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 CT45A8P0DMV1 189 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 CT45A9P0DMV2 189 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 RNH1P13489 461 aaKnown RBP16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ARSBP15848 533 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 NRG3P56975 720 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 TAS2R43P59537 309 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 CT45A2Q5DJT8 189 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 PRR23CQ6ZRP0 262 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ESPNLQ6ZVH7 1005 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ARHGEF39Q8N4T4 335 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 C16orf52Q8NHV5 167 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ORAI1Q96D31 301 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 PELI1Q96FA3 418 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 PDCD1LG2Q9BQ51 273 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ST6GALNAC2Q9UJ37 374 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SDK1Q7Z5N4 2213 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SEC16AO15027 2179 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 HEATR5AQ86XA9 2040 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ORC5O43913 435 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SC5DO75845 299 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 IFNA16P05015 189 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SNRPBP14678 240 aaKnown RBP16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 RAB3BP20337 219 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 PSMB10P40306 273 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 RBM34P42696 430 aaKnown RBP16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 LINC00114Q6XXX2 140 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 Q6ZS52 159 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SNX33Q8WV41 574 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 RLN3Q8WXF3 142 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SGTBQ96EQ0 304 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 Q9N2J8 555 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 MKKSQ9NPJ1 570 aaPredicted RBP16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 PRTFDC1Q9NRG1 225 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SERTAD3Q9UJW9 196 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 GNG8Q9UK08 70 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 C4orf47A7E2U8 309 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 NPR2P20594 1047 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 FGFBP1Q14512 234 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 FAM160A2Q8N612 972 aaPredicted RBP16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 OR6K6Q8NGW6 343 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 ZFP3Q96NJ6 502 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 DGAT2Q96PD7 388 aa16.61■□□□□ 0.25
UBQLN4-201ENST00000368309 SDHBP21912 280 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 GRPRP30550 384 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 ATP12AP54707 1039 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 ERVK-25P63136 954 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 ACTC1P68032 377 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 ACTA1P68133 377 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 EFR3AQ14156 821 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 MTFR2Q6P444 385 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 ZNF550Q7Z398 422 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 TPRA1Q86W33 373 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 RASD2Q96D21 266 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 MMP17Q9ULZ9 603 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 SELENOFO60613 162 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 CTNSO60931 367 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 GDI2P50395 445 aaKnown RBP16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 TRAM1Q15629 374 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 DEFB119Q8N690 84 aa16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 KCTD12Q96CX2 325 aaKnown RBP16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 AK6Q9Y3D8 172 aaKnown RBP16.6■□□□□ 0.25
UBQLN4-201ENST00000368309 IDSB3KWA1 339 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 ATF1P18846 271 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 CD53P19397 219 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 PON3Q15166 354 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 MS4A15Q8N5U1 240 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 BCORP1Q8N888 145 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 SLC2A12Q8TD20 617 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 TRIM63Q969Q1 353 aa16.59■□□□□ 0.25
UBQLN4-201ENST00000368309 MMABQ96EY8 250 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms