RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PRSS33Q8NF86 280 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PTPMT1Q8WUK0 201 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 LIPHQ8WWY8 451 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ASB15Q8WXK1 588 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PTP4A1Q93096 173 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SLC41A2Q96JW4 573 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 DUSP23Q9BVJ7 150 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 GAREM1Q9H706 876 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PNO1Q9NRX1 252 aaKnown RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 QPCTLQ9NXS2 382 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PLEKHB1Q9UF11 243 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 CHRNA9Q9UGM1 479 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SLC6A5Q9Y345 797 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 TMEM184BQ9Y519 407 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 V9GYH0 126 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 ADAMTS9Q9P2N4 1935 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ELOA3DA6NLF2 546 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 OR6C76A6NM76 312 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 RNF13O43567 381 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SDC3O75056 442 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 OR7A10O76100 309 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 NGFRP08138 427 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ZNF883P0CG24 379 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 GIMD1P0DJR0 217 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PTNP21246 168 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 GRK6P43250 576 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 MTNR1BP49286 362 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SEPHS1P49903 392 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SLC16A1P53985 500 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 MXD1Q05195 221 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 IL10RAQ13651 578 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 CRMP1Q14194 572 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 GGTLC2Q14390 218 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ELOA3BQ3SY89 546 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 FNDC7Q5VTL7 733 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 MARCH9Q86YJ5 346 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 EGFL6Q8IUX8 553 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 METTL27Q8N6F8 245 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 ELOA3Q8NG57 546 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 OR4C3Q8NH37 302 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 C3orf49Q96BT1 292 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ERMAPQ96PL5 475 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 GPX7Q96SL4 187 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 YIPF2Q9BWQ6 316 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ENKD1Q9H0I2 346 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ADGRL4Q9HBW9 690 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 COPS7AQ9UBW8 275 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SRPK3Q9UPE1 567 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 C2orf92A0A1B0GVN3 265 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 A0A1B0GX78 115 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 A0A1W2PQL4 384 aaPredicted RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 TCRBV16S1A1N1A0A5B0 115 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 GTPBP1O00178 669 aaKnown RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 ZNF264O43296 627 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 PLPP2O43688 288 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 ADAM11O75078 769 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 ZNF806P0C7X5 589 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 APEHP13798 732 aaKnown RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 PNLIPP16233 465 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 FUT1P19526 365 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 ALAS2P22557 587 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 GTF2E2P29084 291 aaKnown RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 OR1D5P58170 312 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 HSF2Q03933 536 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 SCN1BQ07699 218 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 SKP2Q13309 424 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 NKAIN2Q5VXU1 208 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 HLA-DQA1Q5Y7H0 255 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 PAMR1Q6UXH9 720 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 TPRA1Q86W33 373 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 LAX1Q8IWV1 398 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 OR8H2Q8N162 312 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 FAM98AQ8NCA5 519 aaKnown RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 FAM83FQ8NEG4 500 aaPredicted RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 C17orf47Q8NEP4 570 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
USF1-202ENST00000368020 OR51V1Q9H2C8 321 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 MAU2Q9Y6X3 613 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
USF1-202ENST00000368020 A0A1W2PQD3 144 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 TO15178 435 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 LRP3O75074 770 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 UTS2O95399 124 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 LALBAP00709 142 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 SERPINA3P01011 423 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 OR2T7P0C7T2 308 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 NBL1P41271 181 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms