RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 WASH4PA8MWX3 477 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 RPLP1P05386 114 aaKnown RBP10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 EMP3P54852 163 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 RPS24P62847 133 aaKnown RBP10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 IL13RA1P78552 427 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 CMTM7Q96FZ5 175 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 C20orf27Q9GZN8 174 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 FAM234AQ9H0X4 552 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 RXFP3Q9NSD7 469 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 DNAJB11Q9UBS4 358 aa10.4□□□□□ -0.75
CDC42BPA-205ENST00000366769 DCTN6O00399 190 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 DVL1O14640 695 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 LGI1O95970 557 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 CHRNB4P30926 498 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 SOX9P48436 509 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 DVL1P1P54792 670 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 FRG2Q64ET8 278 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 OR2T27Q8NH04 317 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 SH3RF2Q8TEC5 729 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 HS6ST2Q96MM7 605 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 FRG2BQ96QU4 278 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 UHRF1Q96T88 793 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 FAM173AQ9BQD7 235 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 ST6GALNAC5Q9BVH7 336 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 A0A1W2PRU2 124 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 FAM221BA6H8Z2 402 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 SLC31A2O15432 143 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MAT1AQ00266 395 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 ETFDHQ16134 617 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 GDPD4Q6W3E5 623 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 OR2T33Q8NG76 320 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 PARD6AQ9NPB6 346 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 NDUFV2P19404 249 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 PBX3P40426 434 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 GKN2Q86XP6 184 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 KREMEN2Q8NCW0 462 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 ACTL8Q9H568 366 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 CDH20Q9HBT6 801 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 FBXO45P0C2W1 286 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 RPS19P39019 145 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 PLAC9Q5JTB6 97 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 OR2G6Q5TZ20 316 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 SLC6A16Q9GZN6 736 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TSPAN10Q9H1Z9 355 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 NMNAT1Q9HAN9 279 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 NENFQ9UMX5 172 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TCRBP04435 133 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 ELK1P19419 428 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MBOAT4Q96T53 435 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 LTB4R2Q9NPC1 389 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 DCAF13Q9NV06 445 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 KLHL13Q9P2N7 655 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TP53I11O14683 189 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 POP7O75817 140 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 IMPA1P29218 277 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 HNRNPA3P51991 378 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 UBE2MP61081 183 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 RBMS2Q15434 407 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 RNASE10Q5GAN6 216 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TAC4Q86UU9 113 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TPRA1Q86W33 373 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 THOC6Q86W42 341 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 CPOQ8IVL8 374 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 ZNF695Q8IW36 515 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TMEM234Q8WY98 164 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TOMM40LQ969M1 308 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 YIPF5Q969M3 257 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MOAP1Q96BY2 351 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MCHR1Q99705 422 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TUBB1Q9H4B7 451 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 E7ESA3 106 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 RPL29P47914 159 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TP53I3Q53FA7 332 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TMEM268Q5VZI3 342 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 TMEM71Q6P5X7 295 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 GPR88Q9GZN0 384 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 APMAPQ9HDC9 416 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 PRDM7Q9NQW5 492 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 M0R143 59 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 CSO75390 466 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MMP3P08254 477 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 HBMQ6B0K9 141 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 SUV39H2Q9H5I1 410 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 FAM120CQ9NX05 1096 aaKnown RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 PTPRUQ92729 1446 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 PTPRFP10586 1907 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 OR56A3Q8NH54 315 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 ZFP57Q9NU63 452 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MED16Q9Y2X0 877 aa10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
CDC42BPA-205ENST00000366769 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 RNH1P13489 461 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 SFRP5Q5T4F7 317 aa10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 C5orf46Q6UWT4 87 aa10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 PPTC7Q8NI37 304 aa10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 NXF5Q9H1B4 397 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-205ENST00000366769 COQ4Q9Y3A0 265 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms