RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TRBV4-1A0A0J9YWV2 114 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 DCNP07585 359 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 LINC00597Q9H2U6 94 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 AK6Q9Y3D8 172 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 PLEKHM1Q9Y4G2 1056 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 TP53BP1Q12888 1972 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 SULT2B1O00204 365 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 TMEM225BP0DP42 221 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 PSMB1P20618 241 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 ARNTP27540 789 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 RGRP47804 291 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 GPR18Q14330 331 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 SULF2Q8IWU5 870 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 CRB3Q9BUF7 120 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 CCNOP22674 350 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 RRAS2P62070 204 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 C7orf34Q96L11 122 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 H3BNC9 293 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 RAF1P04049 648 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 AKR1C2P52895 323 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 ZXDBP98169 803 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 CCSAPQ6IQ19 270 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 CAMKMTQ7Z624 323 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 SLC25A46Q96AG3 418 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 RADILQ96JH8 1075 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 PLEKHJ1Q9NW61 149 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 FZD7O75084 574 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 FOLR3P41439 243 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 KIAA1024LP59773 190 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 OR4N5Q8IXE1 308 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 METTL27Q8N6F8 245 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 PPP6CO00743 305 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 ZNF16P17020 682 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 GIFP27352 417 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 EMC4Q5J8M3 183 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 C1orf94Q6P1W5 598 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 OR51T1Q8NGJ9 327 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 MYLIPQ8WY64 445 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 BADQ92934 168 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 NDUFAF4Q9P032 175 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 HOXC11O43248 304 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 F11P03951 625 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 TK1P04183 234 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 GJA5P36382 358 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 KCNJ5P48544 419 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 FOXK1P85037 733 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 TMEM52BQ4KMG9 183 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 DLEU7Q6UYE1 221 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 SMCO3A2RU48 225 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 RPE65Q16518 533 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 S100A7AQ86SG5 101 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 STK35Q8TDR2 534 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 MKRN2Q9H000 416 aaKnown RBP11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 SCPEP1Q9HB40 452 aa11.22□□□□□ -0.61
CDC42BPA-203ENST00000366766 IFNA17P01571 189 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 PRKACBP22694 351 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 RAB39BQ96DA2 213 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 CBLP22681 906 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 ENTHD1Q8IYW4 607 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 KCNG3Q8TAE7 436 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 SEMA6CQ9H3T2 930 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 SIDT1Q9NXL6 827 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 USP36Q9P275 1121 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 DPM1O60762 260 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 S100A7P31151 101 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 HOXD12P35452 270 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 DLSTP36957 453 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 KCNJ8Q15842 424 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 METRNLQ641Q3 311 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 OPN5Q6U736 354 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 CYB561A3Q8NBI2 242 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 OR6T1Q8NGN1 323 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 CNTNAP3BQ96NU0 1288 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 PARPBPQ9NWS1 579 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 CD207Q9UJ71 328 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 GASTP01350 101 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 IRF2P14316 349 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 SLC48A1Q6P1K1 146 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 TMEM184AQ6ZMB5 413 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 Q6ZNX1 250 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 FAM3CQ92520 227 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 WDR76Q9H967 626 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
CDC42BPA-203ENST00000366766 HLA-AP01891 365 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 SERPINA5P05154 406 aa11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR6F1Q8NGZ6 308 aa11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 GFYI3L273 518 aa11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 MTHFD2P13995 350 aa11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 RNF165Q6ZSG1 346 aa11.21□□□□□ -0.62
CDC42BPA-203ENST00000366766 AMDHD1Q96NU7 426 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms