RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 CPNE4Q96A23 557 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 RCN3Q96D15 328 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 PIK3IP1Q96FE7 263 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 LRRC46Q96FV0 321 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 REXO5Q96IC2 774 aaKnown RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 GMPPAQ96IJ6 420 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 ANKRD27Q96NW4 1050 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 ZNF317Q96PQ6 595 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 HS3ST6Q96QI5 342 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 CGREF1Q99674 301 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 MED18Q9BUE0 208 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 SPATA9Q9BWV2 254 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 ACTR6Q9GZN1 396 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 FAM107BQ9H098 131 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 PIGMQ9H3S5 423 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 MTHFD2LQ9H903 347 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 A4GALTQ9NPC4 353 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 EXOSC3Q9NQT5 275 aaKnown RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 SAR1AQ9NR31 198 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 RASSF1Q9NS23 344 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 CCM2LQ9NUG4 571 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 ADPRHL2Q9NX46 363 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 CALML5Q9NZT1 146 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 SEC14L4Q9UDX3 406 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 FOXD3Q9UJU5 478 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 NDUFAF1Q9Y375 327 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 TESMINQ9Y4I5 508 aa3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 ZNF469Q96JG9 3925 aaPredicted RBP3.09□□□□□ -1.91
RNU4-35P-201ENST00000362588 CSPG4Q6UVK1 2322 aa3.09□□□□□ -1.92
RNU4-35P-201ENST00000362588 CR1P17927 2039 aa3.09□□□□□ -1.92
RNU4-35P-201ENST00000362588 AKAP9Q99996 3911 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 MAP1AP78559 2803 aaPredicted RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 NAV3Q8IVL0 2385 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CELSR1Q9NYQ6 3014 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 SONP18583 2426 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 IGKV1D-42A0A075B6H8 117 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 A0A0G2JPF8 293 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 A0A1B0GWA3 101 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 FAM221AA4D161 298 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 TMEM247A6NEH6 219 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 LIPT2A6NK58 231 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CPSF4LA6NMK7 179 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 ZNF716A6NP11 495 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 EVPLLA8MZ36 301 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 TMEM229AB2RXF0 380 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 HNRNPCL2B2RXH8 293 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 HNRNPCL3B7ZW38 293 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 LRRN3E7EW58 273 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 C16orf97H3BN30 126 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CYTIPO60759 359 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 HNRNPCL1O60812 293 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 RAD51DO75771 328 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 PRKD3O94806 890 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 SOX30O94993 753 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 AKR7A3O95154 331 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 PMS2P2O95744 297 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 ADAP00813 363 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 THBS1P07996 1170 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 HNRNPCL4P0DMR1 293 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 GPX2P18283 190 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CD247P20963 164 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 FUT4P22083 530 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CRYGSP22914 178 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 IGHV1-2P23083 117 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 SLC6A2P23975 617 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 IL32P24001 234 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CXCR1P25024 350 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 APOBEC1P41238 236 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 SLC1A3P43003 542 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 RPS5P46782 204 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 OR3A2P47893 321 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 GZMMP51124 257 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 ART1P52961 327 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CRYBA2P53672 197 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 PCBP3P57721 371 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 RGS8P57771 180 aaPredicted RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 TXNL4AP83876 142 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 EGR4Q05215 589 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CEACAM7Q14002 265 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 GNA13Q14344 377 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 LARS2Q15031 903 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 RNPS1Q15287 305 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 TAB1Q15750 504 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 STK11Q15831 433 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 DUSP7Q16829 419 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 TRMT5Q32P41 509 aaKnown RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 TMEM201Q5SNT2 666 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 OTUD3Q5T2D3 398 aaPredicted RBP3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 C1orf140Q5VVS0 124 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 AP1ARQ63HQ0 302 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 WBP2NLQ6ICG8 309 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 NANOGP8Q6NSW7 305 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 REEP3Q6NUK4 255 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 SEZ6L2Q6UXD5 910 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 PAMR1Q6UXH9 720 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 CASP12Q6UXS9 341 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 WDR88Q6ZMY6 472 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 GPAT4Q86UL3 456 aa3.08□□□□□ -1.92
RNU4-35P-201ENST00000362588 ARMC8Q8IUR7 673 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms