RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ABHD12BQ7Z5M8 362 aaPredicted RBP12.07□□□□□ -0.48
VPS29-201ENST00000360579 CCDC103Q8IW40 242 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 OR2T11Q8NH01 316 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 NEU4Q8WWR8 484 aaPredicted RBP12.07□□□□□ -0.48
VPS29-201ENST00000360579 BOD1Q96IK1 185 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 OR7D2Q96RA2 312 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 PRPF18Q99633 342 aaKnown RBP12.07□□□□□ -0.48
VPS29-201ENST00000360579 NAA11Q9BSU3 229 aaPredicted RBP12.07□□□□□ -0.48
VPS29-201ENST00000360579 SOX7Q9BT81 388 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 KATNB1Q9BVA0 655 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 PLK3Q9H4B4 646 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 MOV10Q9HCE1 1003 aaKnown RBP12.07□□□□□ -0.48
VPS29-201ENST00000360579 CTPS2Q9NRF8 586 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 TMEM181Q9P2C4 612 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 EMCNQ9ULC0 261 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 PYCARDQ9ULZ3 195 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 SLC35A3Q9Y2D2 325 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 FLVCR1Q9Y5Y0 555 aa12.07□□□□□ -0.48
VPS29-201ENST00000360579 LRP5LA4QPB2 252 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 VSTM5A8MXK1 200 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 LYPLA1O75608 230 aaPredicted RBP12.06□□□□□ -0.48
VPS29-201ENST00000360579 OR4A8P0C604 315 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 LINC00032P0C843 101 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 LAMP1P11279 417 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 SLC1A3P43003 542 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 HTR3AP46098 478 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 COMPP49747 757 aaPredicted RBP12.06□□□□□ -0.48
VPS29-201ENST00000360579 OR2B6P58173 313 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 SLC35A1P78382 337 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 H3F3AP84243 136 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 TSPO2Q5TGU0 170 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 POMGNT2Q8NAT1 580 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 OR7A2PQ8NGA2 310 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 OR5D16Q8NGK9 328 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 ARL5BQ96KC2 179 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 SLC38A2Q96QD8 506 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 OXSMQ9NWU1 459 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 PSMC3IPQ9P2W1 217 aaPredicted RBP12.06□□□□□ -0.48
VPS29-201ENST00000360579 PCDHGB4Q9UN71 923 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
VPS29-201ENST00000360579 GPR37O15354 613 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 LILRA1O75019 489 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 UGT2B17O75795 530 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 C6orf47O95873 294 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 PROCP04070 461 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 DAOP14920 347 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 ECHS1P30084 290 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 CCT5P48643 541 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 DVL1P1P54792 670 aaPredicted RBP12.05□□□□□ -0.48
VPS29-201ENST00000360579 CDH15P55291 814 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 ACTG1P63261 375 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 ADIPOQQ15848 244 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 ARHGAP11BQ3KRB8 267 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 FAM174BQ3ZCQ3 159 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 SYT10Q6XYQ8 523 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 DEF8Q6ZN54 512 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 TRMT10CQ7L0Y3 403 aaKnown RBP12.05□□□□□ -0.48
VPS29-201ENST00000360579 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 FAM71CQ8NEG0 241 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 OR4F15Q8NGB8 312 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 PMM1Q92871 262 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 TMEM45BQ96B21 275 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 DDIT4LQ96D03 193 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 ZNF317Q96PQ6 595 aaPredicted RBP12.05□□□□□ -0.48
VPS29-201ENST00000360579 ZNF350Q9GZX5 532 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 TUBB1Q9H4B7 451 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 GRPEL1Q9HAV7 217 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 EXD2Q9NVH0 621 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 TMEM45AQ9NWC5 275 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 FIS1Q9Y3D6 152 aa12.05□□□□□ -0.48
VPS29-201ENST00000360579 HEATR1Q9H583 2144 aaKnown RBP12.05□□□□□ -0.48
VPS29-201ENST00000360579 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 KLF11O14901 512 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 CFLARO15519 480 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 PLIN3O60664 434 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 FCMRO60667 390 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 VENTXO95231 258 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 AGR2O95994 175 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 GUSBP08236 651 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 CPA3P15088 417 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 MATN1P21941 496 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 PGM1P36871 562 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 MAP2K6P52564 334 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 UBE2NP61088 152 aaKnown RBP12.04□□□□□ -0.48
VPS29-201ENST00000360579 SLC17A1Q14916 467 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 C3orf36Q3SXR2 165 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 FAM153CQ494X1 144 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 HIKESHIQ53FT3 197 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 KANK2Q63ZY3 851 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 RINLQ6ZS11 566 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 C16orf62Q7Z3J2 963 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 ADGRG3Q86Y34 549 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 DDIASQ8IXT1 998 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 ZNF786Q8N393 782 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 CCDC63Q8NA47 563 aa12.04□□□□□ -0.48
VPS29-201ENST00000360579 SEMA6DQ8NFY4 1073 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms