RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C15orf54Q8N8G6 183 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 SFXN2Q96NB2 322 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 TRIB1Q96RU8 372 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 EPHX3Q9H6B9 360 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 TOX4O94842 621 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 HTR4Q13639 388 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 FAM69BQ5VUD6 431 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 DUSP19Q8WTR2 217 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 ZPBPQ9BS86 351 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 KIDINS220Q9ULH0 1771 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 CD46P15529 392 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 ACRV1P26436 265 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 PAFAH1B3Q15102 231 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 SPRED3Q2MJR0 410 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 NHLRC2Q8NBF2 726 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 OR51L1Q8NGJ5 315 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 C1GALT1C1LP0DN25 315 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 FOLR1P15328 257 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 OMGP23515 440 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 TACR3P29371 465 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 FBXL22Q6P050 247 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC51BQ86UW2 128 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 NRMQ8IXM6 262 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 TCTE3Q8IZS6 198 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 RBFOX1Q9NWB1 397 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 MTHFD2P13995 350 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 SUMO1P63165 101 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 RNF212Q495C1 297 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 KDM1BQ8NB78 822 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 OR2T11Q8NH01 316 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 RBM24Q9BX46 236 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 SORBS1Q9BX66 1292 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF768Q9H5H4 540 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 APOBEC3BQ9UH17 382 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 PIKFYVEQ9Y2I7 2098 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 MST1RQ04912 1400 aa12.4□□□□□ -0.42
SRGAP3-201ENST00000360413 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 CTDSP2O14595 271 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 POLR2CP19387 275 aaPredicted RBP12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 OTX2P32243 289 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 DCTP40126 519 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 MS4A13Q5J8X5 152 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC6A19Q695T7 634 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 C4orf36Q96KX1 117 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 CDCA3Q99618 268 aaPredicted RBP12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 OSGIN2Q9Y236 505 aa12.4□□□□□ -0.43
SRGAP3-201ENST00000360413 SUB1P53999 127 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RAB40BQ12829 278 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CLSTN3Q9BQT9 956 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 FAM198AQ9UFP1 575 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CLDN24A6NM45 220 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF587BE7ETH6 402 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 DEFA4P12838 97 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 GABRR1P24046 479 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ATP1B3P54709 279 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 BIDP55957 195 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 OGDHQ02218 1023 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 BPHLQ86WA6 291 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ZBTB44Q8NCP5 570 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 OR4K5Q8NGD3 323 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 SCARB1Q8WTV0 552 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 C1orf123Q9NWV4 160 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 INSL5Q9Y5Q6 135 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ABCC6O95255 1503 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CEBPZOSA8MTT3 80 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 PEX10O60683 326 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 DMWDQ09019 674 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 TAF9Q16594 264 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CPOQ8IVL8 374 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 DTWD1Q8N5C7 304 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 SENP5Q96HI0 755 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 FAM173AQ9BQD7 235 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 NACAE9PAV3 2078 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CD79AP11912 226 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 KCNE1P15382 129 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 FUT2Q10981 343 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CLINT1Q14677 625 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RTL10Q7L3V2 364 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 KDF1Q8NAX2 398 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 SAT2Q96F10 170 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 TCRBV21S2A2A0A5A6 115 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM72A0PK05 275 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RAD1O60671 282 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CFHP08603 1231 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 ETV3P41162 512 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 CLDN8P56748 225 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RPS18P62269 152 aaKnown RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 C21orf62-AS1Q17RA5 79 aa12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 RPS26P11Q5JNZ5 115 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-201ENST00000360413 TMPRSS5Q9H3S3 457 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms