RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GHDCQ8N2G8 530 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM255BQ8WV15 326 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM239Q8WW34 195 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 ACOT11Q8WXI4 607 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 POM121Q96HA1 1249 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 ALPK1Q96QP1 1244 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TIMP4Q99727 224 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 PKP2Q99959 881 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SLC19A3Q9BZV2 496 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 EXO5Q9H790 373 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 REEP1Q9H902 201 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 STOML1Q9UBI4 398 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 RRP15Q9Y3B9 282 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TRBV4-1A0A0J9YWV2 114 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SH3PXD2BA1X283 911 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 ZC3H12DA2A288 527 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 H0YHG0 523 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 H3BML4 177 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 GNGT2O14610 69 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 CPN1P15169 458 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF708P17019 499 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SHC1P29353 583 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 UGT2B15P54855 530 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 FOXD4Q12950 439 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SEC23BQ15437 767 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM176BQ3YBM2 270 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SYT14P1Q58G82 188 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 DCST1Q5T197 706 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 ARHGAP11AQ6P4F7 1023 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 TBPL2Q6SJ96 375 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 C5orf46Q6UWT4 87 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 AMIGO2Q86SJ2 522 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 GGNQ86UU5 652 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 LSRQ86X29 649 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 CHERPQ8IWX8 916 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 ATP6V1C2Q8NEY4 427 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 DDIT4LQ96D03 193 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 CENPNQ96H22 339 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 EPYCQ99645 322 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 BDH2Q9BUT1 245 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 OR11A1Q9GZK7 315 aa11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 MEPEQ9NQ76 525 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SAMHD1Q9Y3Z3 626 aaKnown RBP11.17□□□□□ -0.62
NIF3L1-201ENST00000359683 SVILO95425 2214 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 A0A0J9YW62 118 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 A0A1B0GTH9 108 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 HTR3EA5X5Y0 456 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 OR14I1A6ND48 311 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 GJE1A6NN92 205 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 CYSRT1A8MQ03 144 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 IGF2P01344 180 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 OPN1LWP04000 364 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 POU3F2P20265 443 aaPredicted RBP11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 DNAJA1P31689 397 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 SUCLG1P53597 346 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 IST1P53990 364 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 MLLT10P55197 1068 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 CLDN15P56746 228 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 CLDN18P56856 261 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 CLDN20P56880 219 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 LSM11P83369 360 aaKnown RBP eCLIP11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 HSF1Q00613 529 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 PPP1R8Q12972 351 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 EXOC3L2Q2M3D2 409 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 CTU2Q2VPK5 515 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 FGD3Q5JSP0 725 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 C1orf140Q5VVS0 124 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 C1QL3Q5VWW1 255 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 ESPNLQ6ZVH7 1005 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 MBOAT2Q6ZWT7 520 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 FGD2Q7Z6J4 655 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM179BQ7Z7N9 219 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 P3H2Q8IVL5 708 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 PQLC1Q8N2U9 271 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 SARAFQ96BY9 339 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 NRBF2Q96F24 287 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 WDYHV1Q96HA8 205 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 ADGRG7Q96K78 797 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 ARL5BQ96KC2 179 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 KLHL15Q96M94 604 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 TMEM185BQ9H7F4 350 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 DCLRE1BQ9H816 532 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 TMCC3Q9ULS5 477 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 MED31Q9Y3C7 131 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 HDGFL3Q9Y3E1 203 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 U3KQV3 271 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 MPDZO75970 2070 aa11.16□□□□□ -0.62
NIF3L1-201ENST00000359683 DOPEY2Q9Y3R5 2298 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 TRAV36DV7A0A075B6V5 113 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 MGRN1O60291 552 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 TFPIP10646 304 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 EDN3P14138 238 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 FPR1P21462 350 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 SFTPDP35247 375 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 CTBP2P56545 445 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 TLE1Q04724 770 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 PRKCDQ05655 676 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 MICAQ29983 383 aa11.15□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms