RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ARSGQ96EG1 525 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 ZNF582Q96NG8 517 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 SPRTNQ9H040 489 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 ABCG5Q9H222 651 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 FBXO34Q9NWN3 711 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 SEC14L3Q9UDX4 400 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 GLS2Q9UI32 602 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 KCNMB2Q9Y691 235 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 IRGMA1A4Y4 181 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 HRKO00198 91 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 FAAHO00519 579 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 CHST10O43529 356 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 NUDT21O43809 227 aaKnown RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 PPP2R1BP30154 601 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 HLA-BQ31612 363 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 FHL5Q5TD97 284 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 DEF8Q6ZN54 512 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 ASB18Q6ZVZ8 466 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 VRK2Q86Y07 508 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 LILRB1Q8NHL6 650 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 ACOT12Q8WYK0 555 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 RIT1Q92963 219 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 THAP7Q9BT49 309 aaPredicted RBP17.14■□□□□ 0.33
SNX11-201ENST00000359238 REG4Q9BYZ8 158 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 LYRM4Q9HD34 91 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 EXTL2Q9UBQ6 330 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 SUSD2Q9UGT4 822 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 NUBP2Q9Y5Y2 271 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 CACNG2Q9Y698 323 aa17.14■□□□□ 0.33
SNX11-201ENST00000359238 MEIKINA0A087WXM9 373 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 IGHV1OR21-1A0A087WYE8 117 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 LANCL1O43813 399 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 HYAL3O43820 417 aaPredicted RBP17.13■□□□□ 0.33
SNX11-201ENST00000359238 ELK1P19419 428 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 DNASE1P24855 282 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 MGAT2Q10469 447 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 PIN1Q13526 163 aaPredicted RBP17.13■□□□□ 0.33
SNX11-201ENST00000359238 DUSP5Q16690 384 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 DCST1Q5T197 706 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 MFSD12Q6NUT3 480 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 TFAP2EQ6VUC0 442 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 ARIH2OSQ8N7S6 290 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 MARC2Q969Z3 335 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 PEX11GQ96HA9 241 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 LINC00052Q96N35 136 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 RNF32Q9H0A6 362 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 NUDT15Q9NV35 164 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 TRAV6A0A075B6T7 132 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 OR10H3O60404 316 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 GLB1P16278 677 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 ELAVL4P26378 380 aaKnown RBP17.13■□□□□ 0.33
SNX11-201ENST00000359238 CSF2RBP32927 897 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 NUP62P37198 522 aaPredicted RBP17.13■□□□□ 0.33
SNX11-201ENST00000359238 BTG2P78543 158 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 PRR5P85299 388 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 RAB40BQ12829 278 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 DUSP8Q13202 625 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 STK11Q15831 433 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 NTRK2Q16620 822 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 OR2L13Q8N349 312 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 TCTN2Q96GX1 697 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 ARHGAP9Q9BRR9 750 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 DPAGT1Q9H3H5 408 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 ADAP2Q9NPF8 381 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 ATPIF1Q9UII2 106 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 SCP2D1Q9UJQ7 156 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 CLCA2Q9UQC9 943 aa17.13■□□□□ 0.33
SNX11-201ENST00000359238 TLCD2A6NGC4 264 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 TP53P04637 393 aaPredicted RBP17.12■□□□□ 0.33
SNX11-201ENST00000359238 ACP2P11117 423 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 EPHA4P54764 986 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 MARCH9Q86YJ5 346 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 SLC30A8Q8IWU4 369 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 OR6M1Q8NGM8 313 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 OR6T1Q8NGN1 323 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 NEIL3Q8TAT5 605 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 PTP4A1Q93096 173 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 SGTBQ96EQ0 304 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 LRR1Q96L50 414 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 DLL4Q9NR61 685 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 EXOSC1Q9Y3B2 195 aaKnown RBP17.12■□□□□ 0.33
SNX11-201ENST00000359238 CLDN16Q9Y5I7 305 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 TEX13CA0A0J9YWL9 993 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 A0A1B0GTQ1 180 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 MFSD2BA6NFX1 497 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 ZNF10P21506 573 aaPredicted RBP17.12■□□□□ 0.33
SNX11-201ENST00000359238 AHCYP23526 432 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 PRICKLE4Q2TBC4 344 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 HACD4Q5VWC8 232 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 PGBD2Q6P3X8 592 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 ZC3H14Q6PJT7 736 aaKnown RBP17.12■□□□□ 0.33
SNX11-201ENST00000359238 TMEM91Q6ZNR0 172 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 CFAP77Q6ZQR2 320 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 FGF11Q92914 225 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 ZDHHC12Q96GR4 267 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 ZNF354BQ96LW1 612 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 GAREM1Q9H706 876 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 CYSLTR2Q9NS75 346 aa17.12■□□□□ 0.33
SNX11-201ENST00000359238 SDHAF2Q9NX18 166 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms