RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 FBXO24O75426 580 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 CT45A10P0DMU9 189 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 ELLP55199 621 aaPredicted RBP9.15□□□□□ -0.95
CHD3-202ENST00000358181 ZNF791Q3KP31 576 aaPredicted RBP9.15□□□□□ -0.95
CHD3-202ENST00000358181 Q56UQ5 140 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 SPANXN4Q5MJ08 99 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 PRR27Q6MZM9 219 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 SLC27A4Q6P1M0 643 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 C19orf35Q6ZS72 473 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 MOB3BQ86TA1 216 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 PDZD9Q8IXQ8 264 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 OR4A4PQ8NGN8 299 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 ABHD4Q8TB40 342 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 MOB3AQ96BX8 217 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 FAM124BQ9H5Z6 455 aaPredicted RBP9.15□□□□□ -0.95
CHD3-202ENST00000358181 MVB12BQ9H7P6 319 aa9.15□□□□□ -0.95
CHD3-202ENST00000358181 IGKV6D-41A0A0C4DH26 115 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 C1orf226A1L170 272 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 RETP07949 1114 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 HLA-DMAP28067 261 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SSR4P51571 173 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 CLDN6P56747 220 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 POU4F2Q12837 409 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 TCTE1Q5JU00 501 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 TRNP1Q6NT89 227 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 DEFB123Q8N688 67 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 CYB561A3Q8NBI2 242 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 NECAP1Q8NC96 275 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SFXN5Q8TD22 340 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 APH1BQ8WW43 257 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SLC25A31Q9H0C2 315 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 UBTD1Q9HAC8 227 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 PIK3C2AO00443 1686 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 LOC102723971A0A1B0GUV8 181 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 FZD9O00144 591 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ALOX12BO75342 701 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 MED6O75586 246 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 BCAS2O75934 225 aaPredicted RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 PPP2CBP62714 309 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 NTHL1P78549 312 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 CATR1Q13166 79 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 TMEM176BQ3YBM2 270 aaPredicted RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.14□□□□□ -0.951e-11■■■■■ 46.3
CHD3-202ENST00000358181 OR1J2Q8NGS2 313 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 TERB2Q8NHR7 220 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SLC7A6Q92536 515 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZNF251Q9BRH9 671 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 GATA5Q9BWX5 397 aaPredicted RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 EBF2Q9HAK2 575 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZNF835Q9Y2P0 537 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 A0A1W2PRD5 423 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 A0A1W2PRF3 423 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 A0A1W2PRM7 423 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZNF815PA8K554 130 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 DDAH2O95865 285 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 LAP3P28838 519 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 HTR7P34969 479 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 PRSS12P56730 875 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ACTC1P68032 377 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ACTA1P68133 377 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 FADS6Q8N9I5 356 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 GLIS1Q8NBF1 620 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ROBO4Q8WZ75 1007 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SAMD8Q96LT4 415 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 C20orf24Q9BUV8 137 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 HEYLQ9NQ87 328 aaPredicted RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 PPP1R3CQ9UQK1 317 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 MCRIP1C9JLW8 97 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 SLC22A1O15245 554 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 DFNA5O60443 496 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 TNFRSF1BP20333 461 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 P2RX3P56373 397 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZNF141Q15928 474 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 UPP1Q16831 310 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 TMEM41BQ5BJD5 291 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZNF595Q8IYB9 648 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ZNF440Q8IYI8 595 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 OR52R1Q8NGF1 315 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 OR8J2Q8NGG1 315 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 NECTIN4Q96NY8 510 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 P2RY12Q9H244 342 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 RDH14Q9HBH5 336 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 HINT3Q9NQE9 182 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 ARPC5O15511 151 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 NTF3P20783 257 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 IMPDH1P20839 514 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 EXOSC7Q15024 291 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 OR8G1Q15617 311 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHD3-202ENST00000358181 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 EMC10Q5UCC4 262 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 KDM4DQ6B0I6 523 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 C15orf54Q8N8G6 183 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 OR5B3Q8NH48 314 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 CHST6Q9GZX3 395 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 MRPS2Q9Y399 296 aaKnown RBP9.14□□□□□ -0.95
CHD3-202ENST00000358181 RPS10-NUDT3A0A1W2PQS6 291 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 A6NIN4 97 aa9.14□□□□□ -0.95
CHD3-202ENST00000358181 F5H5P2 479 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms