RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 TAB1Q15750 504 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 CNIH2Q6PI25 160 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 OR4N2Q8NGD1 307 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC2A12Q8TD20 617 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 KCTD12Q96CX2 325 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 ARSGQ96EG1 525 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 RBM18Q96H35 190 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 VSTM2LQ96N03 204 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 ENKD1Q9H0I2 346 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 C11orf54Q9H0W9 315 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 CMC2Q9NRP2 79 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 U3KQA8 63 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 AKAP13Q12802 2813 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
NIPAL3-203ENST00000358028 COL27A1Q8IZC6 1860 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 A0A1B0GWA3 101 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 LILRA5A6NI73 299 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 B4DXG7 233 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 HRKO00198 91 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 RNF13O43567 381 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 NSA2O95478 260 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 S100A1P23297 94 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 F8A1P23610 371 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 HLA-DMAP28067 261 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 NR4A2P43354 598 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 GALEQ14376 348 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 QPRTQ15274 297 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ZSWIM7Q19AV6 140 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ZFP69Q49AA0 526 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 VASNQ6EMK4 673 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SMARCD3Q6STE5 483 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 NPSR1Q6W5P4 371 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 GLRX5Q86SX6 157 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 GKN2Q86XP6 184 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 KLBQ86Z14 1044 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 GPALPP1Q8IXQ4 340 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 C19orf18Q8NEA5 215 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 OR51G2Q8NGK0 314 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ENKURQ8TC29 256 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ST6GAL2Q96JF0 529 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 FRMD6Q96NE9 622 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 PTCHD1Q96NR3 888 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 CDC6Q99741 560 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 IFT27Q9BW83 186 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 RNF121Q9H920 327 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 MED20Q9H944 212 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 MEPEQ9NQ76 525 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 TRIM36Q9NQ86 728 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 COMMD3Q9UBI1 195 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 WASF3Q9UPY6 502 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SIGLEC7Q9Y286 467 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 DTX4Q9Y2E6 619 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 C12orf71A8MTZ7 269 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 GTPBP1O00178 669 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 PLA2G10O15496 165 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 PRAMEF2O60811 474 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 PTP4A3O75365 173 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 CDC123O75794 336 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SAGP10523 405 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 MYL9P24844 172 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 RBM34P42696 430 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ACAA2P42765 397 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 MAP2K3P46734 347 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 GABRA4P48169 554 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 BTG2P78543 158 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 DAB2P98082 770 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ERV3-1Q14264 604 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 FGFBP1Q14512 234 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF267Q14586 743 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF141Q15928 474 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 THSD4Q6ZMP0 1018 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 TMEM91Q6ZNR0 172 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC35F3Q8IY50 421 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ZNF285Q96NJ3 590 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 UBL7Q96S82 380 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC38A3Q99624 504 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ALG8Q9BVK2 526 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 SLC35A3Q9Y2D2 325 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 N6AMT1Q9Y5N5 214 aa13.12□□□□□ -0.31
NIPAL3-203ENST00000358028 ZZEF1O43149 2961 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 DAPL1A0PJW8 107 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 RIIAD1A6NNX1 92 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 CENPXA8MT69 81 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 CLDN4O14493 209 aa13.11□□□□□ -0.31
NIPAL3-203ENST00000358028 HPGDSO60760 199 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms