RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PDSS1Q5T2R2 415 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 FAM199XQ6PEV8 388 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 NKAIN4Q8IVV8 208 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CMTM4Q8IZR5 234 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ARL14EPQ8N8R7 260 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 FANK1Q8TC84 345 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ING5Q8WYH8 240 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 GHSRQ92847 366 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ELSPBP1Q96BH3 223 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 C4orf36Q96KX1 117 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 HS6ST2Q96MM7 605 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 TEAD3Q99594 435 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 OR10A4Q9H209 315 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 OR52D1Q9H346 318 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CDCP1Q9H5V8 836 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 AUNIPQ9H7T9 357 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ADGRL4Q9HBW9 690 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CA10Q9NS85 328 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CLEC4EQ9ULY5 219 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ETV7Q9Y603 341 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CHD7Q9P2D1 2997 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 PRAMEF2O60811 474 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 KHDRBS3O75525 346 aaKnown RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 TBXA2RP21731 343 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 TRHRP34981 398 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 NCBP2P52298 156 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 KIAA1024LP59773 190 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CDK5R1Q15078 307 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 EIPR1Q53HC9 387 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CCDC157Q569K6 752 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ZNF660Q6AZW8 331 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 OR5M10Q6IEU7 315 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 SLC25A25Q6KCM7 469 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 HEPHL1Q6MZM0 1159 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 RPL22L1Q6P5R6 122 aaKnown RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 LINGO2Q7L985 606 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 DCUN1D3Q8IWE4 304 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CCDC36Q8IYA8 594 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CHST14Q8NCH0 376 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 C17orf47Q8NEP4 570 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 OR2A12Q8NGT7 310 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ZNF671Q8TAW3 534 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 LGALS14Q8TCE9 139 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 RPS4Y2Q8TD47 263 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ZDHHC1Q8WTX9 485 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 SLC22A12Q96S37 553 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 MCHR1Q99705 422 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CHIAQ9BZP6 476 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 GAREM1Q9H706 876 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 EXOSC3Q9NQT5 275 aaKnown RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 ZNF69Q9UC07 566 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 GPR34Q9UPC5 381 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 FLVCR2Q9UPI3 526 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 MRPS7Q9Y2R9 242 aaKnown RBP9.84□□□□□ -0.83
CAPN3-205ENST00000357568 SLC6A5Q9Y345 797 aa9.84□□□□□ -0.83
CAPN3-205ENST00000357568 CDHR4A6H8M9 788 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 HMGN2P05204 90 aaKnown RBP9.83□□□□□ -0.84
CAPN3-205ENST00000357568 BMP7P18075 431 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 AHRP35869 848 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 TSC22D1Q15714 1073 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 CEBPEQ15744 281 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 SFRP4Q6FHJ7 346 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-205ENST00000357568 OR4C11Q6IEV9 310 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 UBE3DQ7Z6J8 389 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 CFAP206Q8IYR0 622 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 PXT1Q8NFP0 134 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 OR4D9Q8NGE8 314 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 OR7D2Q96RA2 312 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 BBS4Q96RK4 519 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 CD180Q99467 661 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 SEC22CQ9BRL7 303 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 C1QTNF6Q9BXI9 259 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 ZDHHC5Q9C0B5 715 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 MS4A7Q9GZW8 240 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-205ENST00000357568 LINC00597Q9H2U6 94 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 SLC6A20Q9NP91 592 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 PRDM6Q9NQX0 595 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 C14orf105Q9NVL8 296 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 NKIRAS2Q9NYR9 191 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 CFAP97Q9P2B7 532 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 EPHA6Q9UF33 1036 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 NINQ8N4C6 2090 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 TRAPPC13A5PLN9 417 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 TEX46H3BTG2 121 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 RTCAO00442 366 aaKnown RBP9.83□□□□□ -0.84
CAPN3-205ENST00000357568 FMO6PO60774 539 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 THY1P04216 161 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 RPN2P04844 631 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 CKMP06732 381 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 MGMTP16455 207 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 FCARP24071 287 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 MPGP29372 298 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 TSTA3Q13630 321 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-205ENST00000357568 GGTLC2Q14390 218 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 ZNF77Q15935 545 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 FAM78AQ5JUQ0 283 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 ALKAL2Q6UX46 152 aa9.83□□□□□ -0.84
CAPN3-205ENST00000357568 APOOLQ6UXV4 268 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms