RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CACNA1CQ13936 2221 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARID1BQ8NFD5 2236 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 LRIT2A6NDA9 550 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 DBX1A6NMT0 343 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF729A6NN14 1252 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 PRR23D1E9PI22 279 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 H3BSH0 61 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 PSMD9O00233 223 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 MAN2B1O00754 1011 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 AIFM1O95831 613 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 FBP1P09467 338 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 PRR23D2P0DMB1 279 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 CSNK2A2P19784 350 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 GPR143P51810 404 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 EPHA4P54764 986 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 DEFA6Q01524 100 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACSM3Q53FZ2 586 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 AVPI1Q5T686 147 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 LINGO2Q7L985 606 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 KRT77Q7Z794 578 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF687Q8N1G0 1237 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACOT4Q8N9L9 421 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 LINC01555Q8NAE3 123 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR1S1Q8NH92 325 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 RPLP0P6Q8NHW5 317 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACOT12Q8WYK0 555 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMEM68Q96MH6 324 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 WDR77Q9BQA1 342 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR10A4Q9H209 315 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 AUNIPQ9H7T9 357 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ISYNA1Q9NPH2 558 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 MRPS18AQ9NVS2 196 aaKnown RBP7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 ASB6Q9NWX5 421 aa7.63□□□□□ -1.19
CDC42SE1-201ENST00000357235 TRAV27A0A087WT01 109 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 DISC1C4P0D8 188 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RP2O75695 350 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 KLK3P07288 261 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SPTBP11277 2137 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CXCL2P19875 107 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 FPR3P25089 353 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TEAD1P28347 426 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RBMS1P29558 406 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 MPIP34949 423 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 BTCP35070 178 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 MTNR1BP49286 362 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 NR0B1P51843 470 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CSNK1G2P78368 415 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ST3GAL2Q16842 350 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TP53I3Q53FA7 332 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAAP20Q6NZ36 180 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 FGD2Q7Z6J4 655 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SFTPA1Q8IWL2 248 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR5K2Q8NHB8 316 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ABHD4Q8TB40 342 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CXorf40AQ8TE69 158 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 GRHL3Q8TE85 626 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 NR4A3Q92570 626 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 GHSRQ92847 366 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PMM1Q92871 262 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CDS1Q92903 461 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARRDC3Q96B67 414 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF514Q96K75 400 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CD180Q99467 661 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TSNAXQ99598 290 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TCEAL7Q9BRU2 100 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RHBGQ9H310 441 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CCDC86Q9H6F5 360 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 C20orf141Q9NUB4 165 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 USP36Q9P275 1121 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 WDR45Q9Y484 360 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF780BQ9Y6R6 833 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CENPVL1A0A0U1RR11 272 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 A0A1B0GWJ7 208 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 C4orf51C9J302 202 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CLN5O75503 358 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SOX30O94993 753 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 HPXP02790 462 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 MT-ND5P03915 603 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 THY1P04216 161 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ANKRD34CP0C6C1 535 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ADRB3P13945 408 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 HPGDP15428 266 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CBR1P16152 277 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 NFYAP23511 347 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 GPX4P36969 197 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 STAT5AP42229 794 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PTGFRP43088 359 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SELENOPP49908 381 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 KLHL26Q53HC5 615 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SSX9Q7RTT3 188 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMEM17Q86X19 198 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SPAG16Q8N0X2 631 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARL14Q8N4G2 192 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CNOT9Q92600 299 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RAB7BQ96AH8 199 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 C11orf49Q9H6J7 331 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ADAP2Q9NPF8 381 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TAS2R3Q9NYW6 316 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SCN2AQ99250 2005 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms