RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 DVL3Q92997 716 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RAB39BQ96DA2 213 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 BOCQ9BWV1 1114 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 PDE7BQ9NP56 450 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 SERTM2A0A1B0GWG4 89 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 SOCS5O75159 536 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 PDGFAP04085 211 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 PKLRP30613 574 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 HTR6P50406 440 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 GPR176Q14439 515 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 TMUB2Q71RG4 321 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 TMEM102Q8N9M5 508 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RTP4Q96DX8 246 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 NPY6RQ99463 290 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 KATNB1Q9BVA0 655 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 XRN1Q8IZH2 1706 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 KDM4EB2RXH2 506 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 GJB5O95377 273 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 TAS2R46P59540 309 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RACK1P63244 317 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 MRPS10P82664 201 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RAB40BQ12829 278 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 FAM110CQ1W6H9 321 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 FAM57BQ71RH2 274 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 SSX7Q7RTT5 188 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 UPRTQ96BW1 309 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 BMFQ96LC9 184 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 HRASLSQ9HDD0 168 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 DCAF13Q9NV06 445 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 AKAP12Q02952 1782 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CPN1P15169 458 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 IL1RNP18510 177 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 GCH1P30793 250 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 VAMP3Q15836 100 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CCL14Q16627 93 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 ENTPD8Q5MY95 495 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 LY6G5CQ5SRR4 150 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 C15orf54Q8N8G6 183 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 OR1S2Q8NGQ3 325 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 FUBP1Q96AE4 644 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 MS4A4EQ96PG1 132 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 F6UZH7 168 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 PTAFRP25105 342 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 TRIM23P36406 574 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 VIPR2P41587 438 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CCNJQ5T5M9 372 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CREB3L2Q70SY1 520 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 PDZD3Q86UT5 571 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CMSS1Q9BQ75 279 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 SLC2A4RGQ9NR83 387 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CLDN24A6NM45 220 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 GPR37L1O60883 481 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 OR2G6Q5TZ20 316 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 DBX2Q6ZNG2 339 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 A6NIZ1 184 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 FAM155AB1AL88 458 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CPT2P23786 658 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 RAP1BP61224 184 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 RAP1AP62834 184 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 KIAA0319Q5VV43 1072 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CHADLQ6NUI6 762 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 LILRA2Q8N149 483 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 C1GALT1Q9NS00 363 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 ZNF443Q9Y2A4 671 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 HBE1P02100 147 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 HAPLN1P10915 354 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 AADACP22760 399 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 EMP2P54851 167 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 ARL16Q0P5N6 197 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 MLLT11Q13015 90 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 STEAP3Q658P3 488 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 PODNL1Q6PEZ8 512 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 VRK2Q86Y07 508 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 MARC2Q969Z3 335 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 KIAA1143Q96AT1 154 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 NIPSNAP3BQ9BS92 247 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 TMEM175Q9BSA9 504 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 MVB12BQ9H7P6 319 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 RAB9BQ9NP90 201 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 SDR39U1Q9NRG7 319 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 VEGFDO43915 354 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CNR1P21554 472 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 IL4RP24394 825 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 CPEB2Q7Z5Q1 589 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 OR8U1Q8NH10 309 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 OR4A16Q8NH70 328 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 C11orf84Q9BUA3 381 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 PLEK2Q9NYT0 353 aa10.33□□□□□ -0.76
GTF3C1-201ENST00000356183 TMEM221A6NGB7 291 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 CLDN1O95832 211 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 EGFP01133 1207 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 UBL4AP11441 157 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 RPA2P15927 270 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 ITGB8P26012 769 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 TRHRP34981 398 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 MMP12P39900 470 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 SRP9P49458 86 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 KIAA1024LP59773 190 aa10.32□□□□□ -0.76
GTF3C1-201ENST00000356183 ARL6IP1Q15041 203 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms