RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 CAP1Q01518 475 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 OLFML2AQ68BL7 652 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 ZNF793Q6ZN11 406 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 ZFP82Q8N141 532 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 OR51A7Q8NH64 312 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 PELI1Q96FA3 418 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 CD180Q99467 661 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 AIF1LQ9BQI0 150 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 NRIP3Q9NQ35 241 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 USP34Q70CQ2 3546 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 DENND4CQ5VZ89 1909 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 TRBV2A0A0J9YWF9 115 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 FAM86C2PA6NEL3 165 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 ITGA10O75578 1167 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 AQP8O94778 261 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 RASGRP1O95267 797 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 SERPINA3P01011 423 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 TIMP2P16035 220 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 STARP49675 285 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 PUSL1Q8N0Z8 303 aaKnown RBP17.44■□□□□ 0.38
PRPF39-201ENST00000355765 HS6ST2Q96MM7 605 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 CTSFQ9UBX1 484 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 FOXJ3Q9UPW0 622 aa17.44■□□□□ 0.38
PRPF39-201ENST00000355765 TCF20Q9UGU0 1960 aaKnown RBP17.44■□□□□ 0.38
PRPF39-201ENST00000355765 CENPVL1A0A0U1RR11 272 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 TMEM272A0A1B0GTI8 110 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 ANKRD61A6NGH8 418 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 RPLP2P05387 115 aaKnown RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 EDNRAP25101 427 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 ELAVL2Q12926 359 aaKnown RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 CDK5R1Q15078 307 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 GUCA2BQ16661 112 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 BEX5Q5H9J7 111 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 FAM209BQ5JX69 171 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 TSSK4Q6SA08 328 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 LDLRAD3Q86YD5 345 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 OR4D10Q8NGI6 311 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 OR6K3Q8NGY3 331 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 CNRIP1Q96F85 164 aaPredicted RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 CMSS1Q9BQ75 279 aaKnown RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 SLC25A32Q9H2D1 315 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 FN3KQ9H479 309 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 INPP5EQ9NRR6 644 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 PSMD9O00233 223 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 LCMT2O60294 686 aaKnown RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 ELFN1P0C7U0 828 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 GKN3PP0CG01 181 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 PVALBP20472 110 aaPredicted RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 DPP4P27487 766 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 GMFBP60983 142 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 POLR2GP62487 172 aaKnown RBP eCLIP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 PRR5P85299 388 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 TNFRSF17Q02223 184 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 TMEM17Q86X19 198 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 LURAP1LQ8IV03 231 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
PRPF39-201ENST00000355765 SMIM19Q96E16 107 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 ZNF75AQ96N20 296 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 ZDHHC5Q9C0B5 715 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 WDR13Q9H1Z4 485 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 GNG8Q9UK08 70 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 PLEKHM1Q9Y4G2 1056 aa17.43■□□□□ 0.38
PRPF39-201ENST00000355765 A0A087WV48 116 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 IFITM5A6NNB3 132 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 PIN1P1O15428 100 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 APOC1P02654 83 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 SRMP19623 302 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 KCNJ3P48549 501 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 ANXA11P50995 505 aaKnown RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 ZNF658BQ4V348 819 aaPredicted RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 LCTLQ6UWM7 567 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 SLC36A1Q7Z2H8 476 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 SETD7Q8WTS6 366 aaKnown RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 TCEAL4Q96EI5 215 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 RHBGQ9H310 441 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 KLHL31Q9H511 634 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 BARX1Q9HBU1 254 aaPredicted RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 CMC2Q9NRP2 79 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 ZNF230Q9UIE0 474 aaPredicted RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 MEIS3P1A6NDR6 274 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 ZNF254O75437 659 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 PPP1R3DO95685 299 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 UBE2IP63279 158 aaKnown RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 PRKCZQ05513 592 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 STX4Q12846 297 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 IL10RAQ13651 578 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 RAB11FIP2Q7L804 512 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 OVCH1Q7RTY7 1134 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 LNX2Q8N448 690 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 NUP43Q8NFH3 380 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 S100A16Q96FQ6 103 aaKnown RBP17.42■□□□□ 0.38
PRPF39-201ENST00000355765 SLC19A3Q9BZV2 496 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 RASL12Q9NYN1 266 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 KCNK7Q9Y2U2 307 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 PLXNA2O75051 1894 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 IDSB3KWA1 339 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 MAN2B1O00754 1011 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 ADAM11O75078 769 aa17.42■□□□□ 0.38
PRPF39-201ENST00000355765 LUMP51884 338 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms