RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 C19orf48Q6RUI8 117 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 B3GLCTQ6Y288 498 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 ZNF517Q6ZMY9 492 aaPredicted RBP23.41■■□□□ 1.34
CLK2-201ENST00000355560 C10orf53Q8N6V4 93 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 SLC37A3Q8NCC5 494 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 GALNT6Q8NCL4 622 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 DYNC2LI1Q8TCX1 351 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 CHCHD6Q9BRQ6 235 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 CHRNA9Q9UGM1 479 aa23.41■■□□□ 1.34
CLK2-201ENST00000355560 EXOGQ9Y2C4 368 aaKnown RBP23.41■■□□□ 1.34
CLK2-201ENST00000355560 TMEM129A0AVI4 362 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 ZC3H12DA2A288 527 aaKnown RBP23.4■■□□□ 1.34
CLK2-201ENST00000355560 HTR3EA5X5Y0 456 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 ZFAND5O76080 213 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 NADKO95544 446 aaPredicted RBP23.4■■□□□ 1.34
CLK2-201ENST00000355560 PAICSP22234 425 aaKnown RBP23.4■■□□□ 1.34
CLK2-201ENST00000355560 RPL4P36578 427 aaKnown RBP23.4■■□□□ 1.34
CLK2-201ENST00000355560 WNT4P56705 351 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 MLLT11Q13015 90 aaPredicted RBP23.4■■□□□ 1.34
CLK2-201ENST00000355560 ITGADQ13349 1161 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 MEPCEQ7L2J0 689 aaKnown RBP23.4■■□□□ 1.34
CLK2-201ENST00000355560 SIRT6Q8N6T7 355 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 CYB561A3Q8NBI2 242 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 OR51G2Q8NGK0 314 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 DUSP19Q8WTR2 217 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 PTP4A1Q93096 173 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 MMP25Q9NPA2 562 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 LOXL2Q9Y4K0 774 aa23.4■■□□□ 1.34
CLK2-201ENST00000355560 CDC40O60508 579 aaKnown RBP eCLIP23.39■■□□□ 1.34
CLK2-201ENST00000355560 UMODP07911 640 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 LIMS3P0CW19 117 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 LIMS4P0CW20 117 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 SOWAHCQ53LP3 525 aaPredicted RBP23.39■■□□□ 1.34
CLK2-201ENST00000355560 POMZP3Q6PJE2 187 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 NAXDQ8IW45 347 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 TMCO6Q96DC7 493 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 MOGAT1Q96PD6 335 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 NANSQ9NR45 359 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 MYOTQ9UBF9 498 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 OSGIN1Q9UJX0 560 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 PCDHGA3Q9Y5H0 932 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 PCNX3Q9H6A9 2034 aa23.39■■□□□ 1.34
CLK2-201ENST00000355560 LOC102723996A0A087X1L8 192 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 ADAM10O14672 748 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 KLF7O75840 302 aaPredicted RBP23.39■■□□□ 1.33
CLK2-201ENST00000355560 IFNGP01579 166 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 PCOLCEQ15113 449 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 TIMM50Q3ZCQ8 353 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 B4GALNT2Q8NHY0 566 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 KTI12Q96EK9 354 aaPredicted RBP23.39■■□□□ 1.33
CLK2-201ENST00000355560 CENPOQ9BU64 300 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 DCSTAMPQ9H295 470 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 OR51V1Q9H2C8 321 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 TNFRSF10DQ9UBN6 386 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 ADAM18Q9Y3Q7 739 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 IER3IP1Q9Y5U9 82 aa23.39■■□□□ 1.33
CLK2-201ENST00000355560 CXCR1P25024 350 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 SLC16A1P53985 500 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 PRPS1P60891 318 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 RPS7P62081 194 aaKnown RBP23.38■■□□□ 1.33
CLK2-201ENST00000355560 BTBD16Q32M84 506 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 DCAF12Q5T6F0 453 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 LHFPL3Q86UP9 236 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 MISPQ8IVT2 679 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 HGDQ93099 445 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 KISS1RQ969F8 398 aaPredicted RBP23.38■■□□□ 1.33
CLK2-201ENST00000355560 IGHA1P01876 353 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 GP1BBP13224 206 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 ENTPD1P49961 510 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 RPS3AP61247 264 aaKnown RBP23.38■■□□□ 1.33
CLK2-201ENST00000355560 QPRTQ15274 297 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 DGUOKQ16854 277 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 DPY19L2P2Q6ZN68 376 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 PSD4Q8NDX1 1056 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 OR52E2Q8NGJ4 325 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 LIPHQ8WWY8 451 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 SECISBP2Q96T21 854 aaKnown RBP23.38■■□□□ 1.33
CLK2-201ENST00000355560 RNF167Q9H6Y7 350 aa23.38■■□□□ 1.33
CLK2-201ENST00000355560 SLC22A31A6NKX4 558 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 OR2J2O76002 312 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 CLUP10909 449 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 HIST1H1CP16403 213 aaKnown RBP23.37■■□□□ 1.33
CLK2-201ENST00000355560 COL28A1Q2UY09 1125 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 SDR9C7Q8NEX9 313 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 OR4K13Q8NH42 304 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 GATAD2BQ8WXI9 593 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 FBXL4Q9UKA2 621 aa23.37■■□□□ 1.33
CLK2-201ENST00000355560 BLOC1S5-TXNDC5H3BN57 136 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 NAGAP17050 411 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 TMED10P49755 219 aaKnown RBP23.36■■□□□ 1.33
CLK2-201ENST00000355560 LIMK1P53667 647 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 LIPKQ5VXJ0 399 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 OR5M10Q6IEU7 315 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 USP43Q70EL4 1123 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 FAM98AQ8NCA5 519 aaKnown RBP23.36■■□□□ 1.33
CLK2-201ENST00000355560 OR2Y1Q8NGV0 311 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 GPR119Q8TDV5 335 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 DEFB126Q9BYW3 111 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 STRADBQ9C0K7 418 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 GALNT9Q9HCQ5 603 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms