RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 OR1E3Q8WZA6 343 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 CTHRC1Q96CG8 243 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 UCKL1Q9NWZ5 548 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 CHRNA9Q9UGM1 479 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 MRPS2Q9Y399 296 aaKnown RBP16.66■□□□□ 0.26
PDZD3-202ENST00000355547 AUP1Q9Y679 476 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 MEIKINA0A087WXM9 373 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 A0A1B0GVI7 797 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 TRABD2BA6NFA1 517 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ZNF860A6NHJ4 632 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 SLC31A1O15431 190 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 NKX2-2O95096 273 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 NGFRP08138 427 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 H2AFB2P0C5Z0 115 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ANKRD34CP0C6C1 535 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 UQCRC1P31930 480 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ACAA2P42765 397 aaKnown RBP16.66■□□□□ 0.26
PDZD3-202ENST00000355547 GBX2P52951 348 aaPredicted RBP16.66■□□□□ 0.26
PDZD3-202ENST00000355547 HCCSP53701 268 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ACTA2P62736 377 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ACTG2P63267 376 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 SIRPAP78324 504 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 UNQ9370/PRO34162Q6UXP9 181 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 LINC00114Q6XXX2 140 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 SYT9Q86SS6 491 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 CDH24Q86UP0 819 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 SHISA5Q8N114 240 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 POMGNT2Q8NAT1 580 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ARSGQ96EG1 525 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 SORCS2Q96PQ0 1159 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 MYADMQ96S97 322 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 GSDMCQ9BYG8 508 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 ACTR6Q9GZN1 396 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 BRD7Q9NPI1 651 aa16.66■□□□□ 0.26
PDZD3-202ENST00000355547 PCDHGA9Q9Y5G4 932 aaKnown RBP16.66■□□□□ 0.26
PDZD3-202ENST00000355547 GPR171O14626 319 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 TSC22D2O75157 780 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 CT62P0C5K7 136 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 POU3F3P20264 500 aaPredicted RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 CCR6P51684 374 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ADPRHP54922 357 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 KIAA1024LP59773 190 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ST3GAL2Q16842 350 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 FGD2Q7Z6J4 655 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 LUZP2Q86TE4 346 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 SLITRK4Q8IW52 837 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 TMEFF1Q8IYR6 380 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ZNF687Q8N1G0 1237 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 SMIM4Q8WVI0 70 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 PLA2G2FQ9BZM2 168 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 RABL2AQ9UBK7 228 aaPredicted RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 CLEC4AQ9UMR7 237 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 MRPS7Q9Y2R9 242 aaKnown RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 A0A1W2PPK0 400 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 POM121BA6NF01 834 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ZNF749O43361 778 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ADAM11O75078 769 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 GUSBP08236 651 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 MYOGP15173 224 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 SNTB2Q13425 540 aaKnown RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 CAMK2DQ13557 499 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 COL28A1Q2UY09 1125 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 RPL22L1Q6P5R6 122 aaKnown RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ARL14Q8N4G2 192 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 OR52E2Q8NGJ4 325 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 OR56B4Q8NH76 319 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 PHYHIPQ92561 330 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 RSC1A1Q92681 617 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ZMYND19Q96E35 227 aaPredicted RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 ERMAPQ96PL5 475 aaPredicted RBP16.65■□□□□ 0.26
PDZD3-202ENST00000355547 TRIM2Q9C040 744 aa16.65■□□□□ 0.26
PDZD3-202ENST00000355547 TBC1D3DA0A087WVF3 549 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 TBC1D3IA0A087WXS9 549 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 A0A1B0GTQ1 180 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 TBC1D3LB9A6J9 549 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 TBC1D3HP0C7X1 549 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 TYRP1P17643 537 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 PRRT3Q5FWE3 981 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 TBC1D3CQ6IPX1 549 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 PRSS41Q7RTY9 318 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 TBC1D3Q8IZP1 549 aaPredicted RBP16.64■□□□□ 0.25
PDZD3-202ENST00000355547 FAM98AQ8NCA5 519 aaKnown RBP16.64■□□□□ 0.25
PDZD3-202ENST00000355547 PHOSPHO2Q8TCD6 241 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 OMA1Q96E52 524 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 CNN2Q99439 309 aaKnown RBP16.64■□□□□ 0.25
PDZD3-202ENST00000355547 NRIP3Q9NQ35 241 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 EMC3Q9P0I2 261 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 EIF3KQ9UBQ5 218 aaKnown RBP16.64■□□□□ 0.25
PDZD3-202ENST00000355547 SPACA6W5XKT8 324 aa16.64■□□□□ 0.25
PDZD3-202ENST00000355547 A6NCN8 305 aa16.63■□□□□ 0.25
PDZD3-202ENST00000355547 H0YGG7 62 aa16.63■□□□□ 0.25
PDZD3-202ENST00000355547 ZNF593O00488 134 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 MAGEB4O15481 346 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 MTRF1O75570 445 aaKnown RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 WNT1P04628 370 aa16.63■□□□□ 0.25
PDZD3-202ENST00000355547 HIST1H1CP16403 213 aaKnown RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 KIR2DL1P43626 348 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 ARF3P61204 181 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 RNASE12Q5GAN4 147 aaKnown RBP16.63■□□□□ 0.25
PDZD3-202ENST00000355547 TOR2AQ5JU69 321 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms