RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LOC105369274A0A096LPK9 316 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF593O00488 134 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-202ENST00000355133 MRPS14O60783 128 aaKnown RBP12.31□□□□□ -0.44
SCN8A-202ENST00000355133 CD79BP40259 229 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 CXADRP78310 365 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 NCCRP1Q6ZVX7 275 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-202ENST00000355133 OR4N4Q8N0Y3 316 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 VN1R2Q8NFZ6 395 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 BRIX1Q8TDN6 353 aaKnown RBP12.31□□□□□ -0.44
SCN8A-202ENST00000355133 FOXRED1Q96CU9 486 aaPredicted RBP12.31□□□□□ -0.44
SCN8A-202ENST00000355133 BCL7BQ9BQE9 202 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 MCOLN1Q9GZU1 580 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 ADAM29Q9UKF5 820 aa12.31□□□□□ -0.44
SCN8A-202ENST00000355133 NAP1L6A6NFF2 107 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 GASTP01350 101 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 IFNA10P01566 189 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 ARAFP10398 606 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 ACP2P11117 423 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 SIRPAP78324 504 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 EMX1Q04741 257 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 PDE7AQ13946 482 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 GK2Q14410 553 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF691Q5VV52 312 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 TSSK4Q6SA08 328 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 FBXW12Q6X9E4 464 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 CLEC14AQ86T13 490 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 C17orf50Q8WW18 174 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF566Q969W8 418 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 TCRBV3S1A0A5B6 114 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 METTL15A6NJ78 407 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 CAV3P56539 151 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 RPS18P62269 152 aaKnown RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 TRIM61Q5EBN2 209 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 AAED1Q7RTV5 226 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 KIAA0907Q7Z7F0 614 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 OR8J2Q8NGG1 315 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 OR2T11Q8NH01 316 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 BORCS7Q96B45 105 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 KATNB1Q9BVA0 655 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 GPR160Q9UJ42 338 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 OR6C6A6NF89 314 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 HSPB6O14558 160 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 LTBQ06643 244 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 OR2G6Q5TZ20 316 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 TBPL2Q6SJ96 375 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 SORCS2Q96PQ0 1159 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 SNX18Q96RF0 628 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 MICU1Q9BPX6 476 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 MRI1Q9BV20 369 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 NOSIPQ9Y314 301 aaKnown RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 CEBPZOSA8MTT3 80 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 F8W036 122 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 KLKB1P03952 638 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 OR8G3PP0DMU2 310 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 MAOAP21397 527 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 IL2RGP31785 369 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 ALDH3B1P43353 468 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 RAB5BP61020 215 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 BLOC1S1P78537 153 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 IL13RA1P78552 427 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 SF3A2Q15428 464 aaKnown RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 SLC41A2Q96JW4 573 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 COQ10AQ96MF6 247 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 PRRT1Q99946 306 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.3□□□□□ -0.44
SCN8A-202ENST00000355133 PLEKHM1Q9Y4G2 1056 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
SCN8A-202ENST00000355133 GLSO94925 669 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 PTHP01270 115 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SLC35F3Q8IY50 421 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF679Q8IYX0 411 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF740Q8NDX6 193 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZFP90Q8TF47 636 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ASB17Q8WXJ9 295 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 PSMF1Q92530 271 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 PRELID1Q9Y255 219 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 MYH7P12883 1935 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 MYH6P13533 1939 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 A0A087WUU8 490 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SERINC4A6NH21 518 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SOCS7O14512 581 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 FCGR2AP12318 317 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ZNF750Q32MQ0 723 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 SLC38A5Q8WUX1 472 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 KHSRPQ92945 711 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCN8A-202ENST00000355133 TNFRSF13CQ96RJ3 184 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 EHFQ9NZC4 300 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 LINC01553A4QN01 128 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 UTS2O95399 124 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 MEF2DQ14814 521 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 ADAMTSL4Q6UY14 1074 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 OR13H1Q8NG92 308 aa12.29□□□□□ -0.44
SCN8A-202ENST00000355133 FAM174AQ8TBP5 190 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms