RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PRPS1P60891 318 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 CSTF1Q05048 431 aaKnown RBP20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 BCL2A1Q16548 175 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 KLHL26Q53HC5 615 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 NR2C2APQ86WQ0 139 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 PDE7BQ9NP56 450 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 OGG1O15527 345 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 LYRM1O43325 122 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 RPL4P36578 427 aaKnown RBP20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 GBX2P52951 348 aaPredicted RBP20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 TBRG1Q3YBR2 411 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 ACSM3Q53FZ2 586 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 SLC35D3Q5M8T2 416 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 SFXN4Q6P4A7 337 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 ZNF527Q8NB42 609 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 SDR9C7Q8NEX9 313 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 GHSRQ92847 366 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 PPIL3Q9H2H8 161 aaKnown RBP20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 NPFFR2Q9Y5X5 522 aa20.42■□□□□ 0.86
NKX2-1-201ENST00000354822 FITM1A5D6W6 292 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 CENPXA8MT69 81 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 OR7A10O76100 309 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 CD1AP06126 327 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 CD27P26842 260 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 CD38P28907 300 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 MADCAM1Q13477 382 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 ZFP69Q49AA0 526 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 LSRQ86X29 649 aaPredicted RBP20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 SLITRK4Q8IW52 837 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 LMX1AQ8TE12 382 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 UBE2ZQ9H832 354 aaPredicted RBP20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 LMAN1LQ9HAT1 526 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 B3GAT2Q9NPZ5 323 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 ENAMQ9NRM1 1142 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 DDX28Q9NUL7 540 aaKnown RBP20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 C2orf42Q9NWW7 574 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 SZT2Q5T011 3432 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 TRAV1-2A0A0B4J238 106 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 IGHV1OR15-9A0A0B4J2B8 117 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 TLCD2A6NGC4 264 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 MCIDASD6RGH6 385 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 PNMTP11086 282 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 RBMS1P29558 406 aaKnown RBP20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 ACVR1BP36896 505 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 FNTBP49356 437 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 DIO1P49895 249 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 TRILQ7L0X0 811 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 C17orf47Q8NEP4 570 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 OR5J2Q8NH18 312 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 OR14A16Q8NHC5 309 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 RLN3Q8WXF3 142 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 SLC7A6Q92536 515 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 C3orf49Q96BT1 292 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 ZMYND19Q96E35 227 aaPredicted RBP20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 MARCH7Q9H992 704 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 UBQLN4Q9NRR5 601 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 SOHLH2Q9NX45 425 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 ST6GALNAC2Q9UJ37 374 aa20.41■□□□□ 0.86
NKX2-1-201ENST00000354822 FAM240BA0A1B0GVZ2 78 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 A8MU76 341 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 GNB5O14775 395 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 NPR2P20594 1047 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 THBS2P35442 1172 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 GRM7Q14831 915 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 NNATQ16517 81 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 WBP2NLQ6ICG8 309 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 UBE2J2Q8N2K1 259 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 CAPSLQ8WWF8 208 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 NRIP3Q9NQ35 241 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 RASD1Q9Y272 281 aa20.4■□□□□ 0.86
NKX2-1-201ENST00000354822 CD1CP29017 333 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 PPM1FP49593 454 aaPredicted RBP20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 NDUFA5Q16718 116 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 CDONQ4KMG0 1287 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 SSX6Q7RTT6 188 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 C17orf82Q86X59 251 aaPredicted RBP20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 ZNF687Q8N1G0 1237 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 FAM160A2Q8N612 972 aaPredicted RBP20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 LRRC17Q8N6Y2 441 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 FAM71CQ8NEG0 241 aa20.39■□□□□ 0.86
NKX2-1-201ENST00000354822 OR2W5A6NFC9 320 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 TRIM3O75382 744 aaPredicted RBP20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 WNT1P04628 370 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 PSKH1P11801 424 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 HPGDP15428 266 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 HSF2Q03933 536 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 DBPQ10586 325 aaPredicted RBP20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 IL10RAQ13651 578 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 NDUFAF6Q330K2 333 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 CCDC58Q4VC31 144 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 RPL22L1Q6P5R6 122 aaKnown RBP20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 SLC35F2Q8IXU6 374 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 NPEPL1Q8NDH3 523 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 SNX33Q8WV41 574 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 SMIM19Q96E16 107 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 GPX7Q96SL4 187 aaPredicted RBP20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 RAB33BQ9H082 229 aa20.39■□□□□ 0.85
NKX2-1-201ENST00000354822 TMEM265A0A087WTH1 108 aa20.38■□□□□ 0.85
NKX2-1-201ENST00000354822 A0A1W2PR77 199 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms