RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF525Q8N782 197 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ZNF511Q8NB15 262 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 FBXO36Q8NEA4 188 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 OR10H5Q8NGA6 315 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 UBTD2Q8WUN7 234 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 FAM168AQ92567 244 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 COG8Q96MW5 612 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SERPINI1Q99574 410 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ANKRD60Q9BZ19 345 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 TRIM2Q9C040 744 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 RAD21L1Q9H4I0 556 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ZBTB26Q9HCK0 441 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SDHAF3Q9NRP4 125 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 FBXO34Q9NWN3 711 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ZNF639Q9UID6 485 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 SNX24Q9Y343 169 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 RNF11Q9Y3C5 154 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 PCDHA9Q9Y5H5 950 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ZNF780BQ9Y6R6 833 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 ROS1P08922 2347 aa9.96□□□□□ -0.82
RTN3-204ENST00000354497 LOC100289279A0A1B0GTE1 492 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 C1orf226A1L170 272 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 OR6C65A6NJZ3 312 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 H0YIV9 168 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 CXCL13O43927 109 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 RAMP1O60894 148 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 NOL3O60936 208 aaKnown RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 THBS1P07996 1170 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 DHRS4L1P0CG22 281 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 GP5P40197 560 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 PNLIPRP2P54317 469 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 GALK2Q01415 458 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 RELQ04864 619 aaPredicted RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 ZNF155Q12901 538 aaPredicted RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 PDIA2Q13087 525 aaKnown RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 ITGADQ13349 1161 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 FRG1Q14331 258 aaKnown RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 GRAMD1BQ3KR37 738 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 ESCO2Q56NI9 601 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 UBAP2Q5T6F2 1119 aaKnown RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 BHLHB9Q6PI77 547 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 NPSR1Q6W5P4 371 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 GGNQ86UU5 652 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 ARMC8Q8IUR7 673 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 GALNT4Q8N4A0 578 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 OR4N2Q8NGD1 307 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 OR10D3Q8NH80 312 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 KAT2AQ92830 837 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 SGK3Q96BR1 496 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 LRRC39Q96DD0 335 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 TMEM80Q96HE8 168 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 AHSPQ9NZD4 102 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 FLRT3Q9NZU0 649 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 ENPP5Q9UJA9 477 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 PSME2Q9UL46 239 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 PRPF19Q9UMS4 504 aaKnown RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 VDAC3Q9Y277 283 aa9.95□□□□□ -0.82
RTN3-204ENST00000354497 RBMX2Q9Y388 322 aaKnown RBP9.95□□□□□ -0.82
RTN3-204ENST00000354497 SLC35F4A4IF30 521 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 DPRXA6NFQ7 191 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 FOXE1O00358 373 aaPredicted RBP9.94□□□□□ -0.82
RTN3-204ENST00000354497 KERAO60938 352 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 SEMA3DO95025 777 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 SNAPINO95295 136 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CT45A8P0DMV1 189 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CT45A9P0DMV2 189 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 GFAPP14136 432 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CFPP27918 469 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 ADH6P28332 368 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 IL12AP29459 219 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 AGTR1P30556 359 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 RFX3P48380 749 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CENPAP49450 140 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 GZMKP49863 264 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 RAB10P61026 200 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 MRPS15P82914 257 aaKnown RBP9.94□□□□□ -0.82
RTN3-204ENST00000354497 CD300CQ08708 224 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 SF3A3Q12874 501 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTN3-204ENST00000354497 MRPL28Q13084 256 aaKnown RBP9.94□□□□□ -0.82
RTN3-204ENST00000354497 GGTLC2Q14390 218 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 FASTKD3Q14CZ7 662 aaKnown RBP9.94□□□□□ -0.82
RTN3-204ENST00000354497 RAB35Q15286 201 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.94□□□□□ -0.82
RTN3-204ENST00000354497 CT45A2Q5DJT8 189 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 SGO1Q5FBB7 561 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 MFSD12Q6NUT3 480 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 AMIGO2Q86SJ2 522 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 GALNT10Q86SR1 603 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 MARCH3Q86UD3 253 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 DTX2Q86UW9 622 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 PACRGLQ8N7B6 248 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 BANPQ8N9N5 519 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 WDR20Q8TBZ3 569 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 RAB2BQ8WUD1 216 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 HSD17B8Q92506 261 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 KISS1RQ969F8 398 aaPredicted RBP9.94□□□□□ -0.82
RTN3-204ENST00000354497 ATP6V1E2Q96A05 226 aa9.94□□□□□ -0.82
RTN3-204ENST00000354497 C3orf49Q96BT1 292 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms