RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CMTM3Q96MX0 182 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 OR14A2Q96R54 314 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 NRIP3Q9NQ35 241 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 GDE1Q9NZC3 331 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 CYR61O00622 381 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 SLC31A1O15431 190 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 NKX2-2O95096 273 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 TYRP1P17643 537 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 ACAA2P42765 397 aaKnown RBP22.57■■□□□ 1.2
CPNE1-202ENST00000352393 FIGLAQ6QHK4 219 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 GRAMD2AQ8IUY3 354 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 RPLP0P6Q8NHW5 317 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 HOXB13Q92826 284 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-202ENST00000352393 MYADMQ96S97 322 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 ACTR6Q9GZN1 396 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 DLL4Q9NR61 685 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 PCOLCE2Q9UKZ9 415 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 AK6Q9Y3D8 172 aaKnown RBP22.57■■□□□ 1.2
CPNE1-202ENST00000352393 NPTNQ9Y639 398 aa22.57■■□□□ 1.2
CPNE1-202ENST00000352393 C5orf42Q9H799 3197 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF749O43361 778 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 HIST1H1CP16403 213 aaKnown RBP22.56■■□□□ 1.2
CPNE1-202ENST00000352393 SDHBP21912 280 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 GDNFP39905 211 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 EMDP50402 254 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 KIAA1024LP59773 190 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 SRP54P61011 504 aaKnown RBP22.56■■□□□ 1.2
CPNE1-202ENST00000352393 SNTB2Q13425 540 aaKnown RBP22.56■■□□□ 1.2
CPNE1-202ENST00000352393 RPL22L1Q6P5R6 122 aaKnown RBP22.56■■□□□ 1.2
CPNE1-202ENST00000352393 PRSS45Q7RTY3 260 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 CDH24Q86UP0 819 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 SLC35F2Q8IXU6 374 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 FAM98AQ8NCA5 519 aaKnown RBP22.56■■□□□ 1.2
CPNE1-202ENST00000352393 CTHRC1Q96CG8 243 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 DNAJB12Q9NXW2 375 aaKnown RBP22.56■■□□□ 1.2
CPNE1-202ENST00000352393 EMC3Q9P0I2 261 aa22.56■■□□□ 1.2
CPNE1-202ENST00000352393 NAA10P41227 235 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-202ENST00000352393 ZP1P60852 638 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 PPP2CBP62714 309 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 PPP2CAP67775 309 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 TMEM240Q5SV17 173 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 UNQ9370/PRO34162Q6UXP9 181 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 BEST4Q8NFU0 473 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 OR5T3Q8NGG3 340 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 OR4K13Q8NH42 304 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 C20orf85Q9H1P6 137 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 SLC6A17Q9H1V8 727 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 PLEKHA1Q9HB21 404 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 ATG2AQ2TAZ0 1938 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 POM121BA6NF01 834 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 MEN1O00255 615 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 ADRB1P08588 477 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 HSF2Q03933 536 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 CRYZQ08257 329 aaKnown RBP22.55■■□□□ 1.2
CPNE1-202ENST00000352393 LGALSLQ3ZCW2 172 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-202ENST00000352393 ALG10BQ5I7T1 473 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 LINC00114Q6XXX2 140 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 IZUMO1Q8IYV9 350 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 CCL4L1Q8NHW4 92 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 DHRS9Q9BPW9 319 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 PLA2G2FQ9BZM2 168 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 TRIM2Q9C040 744 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 CCDC86Q9H6F5 360 aaKnown RBP22.55■■□□□ 1.2
CPNE1-202ENST00000352393 RABL2AQ9UBK7 228 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-202ENST00000352393 SCP2D1Q9UJQ7 156 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 RABL2BQ9UNT1 228 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 ENTPD2Q9Y5L3 495 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 SPACA6W5XKT8 324 aa22.55■■□□□ 1.2
CPNE1-202ENST00000352393 ATG2BQ96BY7 2078 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 TRBV23OR9-2A0A075B6M9 112 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 MTFR2Q6P444 385 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 SEZ6L2Q6UXD5 910 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 CMTM4Q8IZR5 234 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 OR8H3Q8N146 312 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 PIAS4Q8N2W9 510 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF614Q8N883 585 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 OR14A16Q8NHC5 309 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF671Q8TAW3 534 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 MAP6Q96JE9 813 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ZFYVE21Q9BQ24 234 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ACTR10Q9NZ32 417 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 GLTPQ9NZD2 209 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 TICRRQ7Z2Z1 1910 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 TRBV2A0A0J9YWF9 115 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ZSCAN5BA6NJL1 495 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 H0YGG7 62 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 NDUFB2O95178 105 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 CBX7O95931 251 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 DNASE1P24855 282 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ARF3P61204 181 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-202ENST00000352393 GPR139Q6DWJ6 353 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 LSMEM1Q8N8F7 131 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ZNF784Q8NCA9 323 aaPredicted RBP22.54■■□□□ 1.2
CPNE1-202ENST00000352393 OR51L1Q8NGJ5 315 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 RSC1A1Q92681 617 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 DERL3Q96Q80 235 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 GFI1Q99684 422 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 ANKRD10Q9NXR5 420 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 NCDNQ9UBB6 729 aa22.54■■□□□ 1.2
CPNE1-202ENST00000352393 GNG8Q9UK08 70 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms