RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KRBOX4Q5JUW0 171 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 LY6G6FQ5SQ64 297 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 GLT8D1Q68CQ7 371 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 MAMDC2Q7Z304 686 aaPredicted RBP12.25□□□□□ -0.45
IFT88-202ENST00000351808 OR10R2Q8NGX6 335 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 NUBPLQ8TB37 319 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 SMPDL3BQ92485 455 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 ISOC2Q96AB3 205 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 C4orf36Q96KX1 117 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 HS6ST2Q96MM7 605 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 NDC1Q9BTX1 674 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 SUV39H2Q9H5I1 410 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 PPP4R1LQ9P1A2 415 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 ZMIZ1Q9ULJ6 1067 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 TNFSF18Q9UNG2 199 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 ZNF106Q9H2Y7 1883 aaKnown RBP12.25□□□□□ -0.45
IFT88-202ENST00000351808 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 OR2AT4A6NND4 320 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 CACNB4O00305 520 aaPredicted RBP12.25□□□□□ -0.45
IFT88-202ENST00000351808 FGF16O43320 207 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 CLDN11O75508 207 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 OR2F2O95006 317 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 ADH1CP00326 375 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 MT-ND5P03915 603 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 MRPL3P09001 348 aaKnown RBP12.25□□□□□ -0.45
IFT88-202ENST00000351808 UQCRC2P22695 453 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 GABRR2P28476 465 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 HOXA6P31267 233 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 PCP4P48539 62 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 RPS15P62841 145 aaKnown RBP12.25□□□□□ -0.45
IFT88-202ENST00000351808 OR2F1Q13607 317 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 RHOUQ7L0Q8 258 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 AUTS2Q8WXX7 1259 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 MISP3Q96FF7 219 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 ACBD6Q9BR61 282 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 TTTY10Q9BZA0 68 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 CHRDQ9H2X0 955 aa12.25□□□□□ -0.45
IFT88-202ENST00000351808 hCG_1809904A0A1W2PP81 198 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 A0A1W2PR64 198 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 A0A1W2PRV1 198 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 YIF1AO95070 293 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 FGF19O95750 216 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 CERS1P27544 350 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 PYCR1P32322 319 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 MNDAP41218 407 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 ILF3Q12906 894 aaKnown RBP eCLIP12.24□□□□□ -0.45
IFT88-202ENST00000351808 TSPAN31Q12999 210 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 TRAM1Q15629 374 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 SYPL1Q16563 259 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 TMEM69Q5SWH9 247 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 STPG1Q5TH74 334 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 RNF113BQ8IZP6 322 aaKnown RBP12.24□□□□□ -0.45
IFT88-202ENST00000351808 LINC00471Q8N535 108 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 ASB11Q8WXH4 323 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 OSTF1Q92882 214 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 CXorf40BQ96DE9 158 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 RAB3CQ96E17 227 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 MED8Q96G25 268 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 TEAD3Q99594 435 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 SLC6A16Q9GZN6 736 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 PRDM13Q9H4Q3 707 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 TRAV1-2A0A0B4J238 106 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 NPIPB9F8W1W9 429 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 TGM5O43548 720 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 OR4Q2P0C623 313 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 PTNP21246 168 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 DLSTP36957 453 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 CSNK1EP49674 416 aaKnown RBP12.24□□□□□ -0.45
IFT88-202ENST00000351808 NRG3P56975 720 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 ERV3-1Q14264 604 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 OR7A5Q15622 319 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 ADAM5Q6NVV9 412 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 COMMD6Q7Z4G1 85 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 THOC6Q86W42 341 aaKnown RBP12.24□□□□□ -0.45
IFT88-202ENST00000351808 TGIF2LXQ8IUE1 241 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 THEM5Q8N1Q8 247 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 C16orf78Q8WTQ4 265 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 ZNF607Q96SK3 696 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 A4GALTQ9NPC4 353 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 POT1Q9NUX5 634 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 MBD1Q9UIS9 605 aaPredicted RBP12.24□□□□□ -0.45
IFT88-202ENST00000351808 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 KCNAB3O43448 404 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 CD79AP11912 226 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 SLC16A1P53985 500 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 CDH4P55283 916 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 PGGHGQ32M88 737 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 HENMT1Q5T8I9 393 aaKnown RBP12.24□□□□□ -0.45
IFT88-202ENST00000351808 C9orf131Q5VYM1 1079 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 OR4C16Q8NGL9 310 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 SEC22AQ96IW7 307 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 BRF2Q9HAW0 419 aa12.24□□□□□ -0.45
IFT88-202ENST00000351808 GFOD1Q9NXC2 390 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms