RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CCDC85BQ15834 202 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 HYAL4Q2M3T9 481 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PLA1AQ53H76 456 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 DMKNQ6E0U4 476 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SFXN4Q6P4A7 337 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RAB42Q8N4Z0 105 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 FOXN4Q96NZ1 517 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 MOGAT1Q96PD6 335 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 OR14A2Q96R54 314 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NPAS1Q99742 590 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 JAM3Q9BX67 310 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RAB11FIP5Q9BXF6 653 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 KCNN2Q9H2S1 579 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ANKRD19PQ9H560 264 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 KLHL1Q9NR64 748 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RBFOX1Q9NWB1 397 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NPAP1Q9NZP6 1156 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PTGFRNQ9P2B2 879 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ICAM5Q9UMF0 924 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 AK6Q9Y3D8 172 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PRRC2CQ9Y520 2896 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 H7C1C5 153 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 EEF1E1O43324 174 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SCO2O43819 266 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 CPNE3O75131 537 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 THBS1P07996 1170 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 TMIGD3P0DMS9 266 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 CLDN20P56880 219 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 KIAA1024LP59773 190 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RPS7P62081 194 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 LCN6P62502 163 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 EGR4Q05215 589 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RGS1Q08116 209 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 FZD2Q14332 565 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 AMZ1Q400G9 498 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 C1QL3Q5VWW1 255 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 FAAP20Q6NZ36 180 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RNF44Q7L0R7 432 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 TRIM69Q86WT6 500 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SERPINA12Q8IW75 414 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 LINC00471Q8N535 108 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 CSNK1A1LQ8N752 337 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 HMGB4Q8WW32 186 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 HOXB13Q92826 284 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 VSTM2LQ96N03 204 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 MARVELD1Q9BSK0 173 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 THAP7Q9BT49 309 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 CYSLTR2Q9NS75 346 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 POT1Q9NUX5 634 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SLC13A4Q9UKG4 626 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 FLVCR2Q9UPI3 526 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 IER3IP1Q9Y5U9 82 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 MAU2Q9Y6X3 613 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 BOD1L1Q8NFC6 3051 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NUP210LQ5VU65 1888 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NPIPB9F8W1W9 429 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 G3V3Q6 166 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RGS9O75916 674 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NKX2-2O95096 273 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 HLA-DPB1P04440 258 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 WNT1P04628 370 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ARSBP15848 533 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PRKCAP17252 672 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SLC6A1P30531 599 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 CDKN2AP42771 156 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PPP3R1P63098 170 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 HTR4Q13639 388 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 KIR2DS3Q14952 304 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ACSM3Q53FZ2 586 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NKAIN2Q5VXU1 208 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 TMEM184AQ6ZMB5 413 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 OAFQ86UD1 273 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF511Q8NB15 262 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 NPEPL1Q8NDH3 523 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 OR10AC1Q8NH08 325 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ERMAPQ96PL5 475 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 ELF4Q99607 663 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SLC25A18Q9H1K4 315 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 TSPAN10Q9H1Z9 355 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 KCNK15Q9H427 330 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 FOLH1BQ9HBA9 442 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 SLC23A1Q9UHI7 598 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 RWDD3Q9Y3V2 267 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 CDC14CA4D256 554 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 CCDC85CA6NKD9 419 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 DUXAA6NLW8 204 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FAM25AB3EWG3 89 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FAM25CB3EWG5 89 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FAM25GB3EWG6 89 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 H0YC42 278 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 WNT11O96014 354 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 KRT8P05787 483 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 DBIP07108 87 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 HNRNPA2B1P22626 353 aaKnown RBP5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GFERP55789 205 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 ERVK-25P63136 954 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 GAS6Q14393 721 aa5.53□□□□□ -1.52
CLCN3-201ENST00000347613 FCN2Q15485 313 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms