RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZNF613Q6PF04 617 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 ADGRG5Q8IZF4 528 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 SARAFQ96BY9 339 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 TUBA1CQ9BQE3 449 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 MEPEQ9NQ76 525 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 NUFIP1Q9UHK0 495 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 EDARQ9UNE0 448 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 SCN10AQ9Y5Y9 1956 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 TRAV27A0A087WT01 109 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 LCMT2O60294 686 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 LCKP06239 509 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 CLDN17P56750 224 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 C4orf46Q504U0 113 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 MARCH3Q86UD3 253 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 LSM14AQ8ND56 463 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 ACOT13Q9NPJ3 140 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 PLA2G3Q9NZ20 509 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 PPT2Q9UMR5 302 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 B3GALT1Q9Y5Z6 326 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 MITFO75030 526 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 PPICP45877 212 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 XKR7Q5GH72 579 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 BAIAP2L2Q6UXY1 529 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC16A14Q7RTX9 510 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 SPRED1Q7Z699 444 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 OR51L1Q8NGJ5 315 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 CPT1CQ8TCG5 803 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC41A2Q96JW4 573 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 C20orf27Q9GZN8 174 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 NUDT7P0C024 238 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 PROX2Q3B8N5 592 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 CHRFAM7AQ494W8 412 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 PLCZ1Q86YW0 608 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 FAM46BQ96A09 425 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC22A4Q9H015 551 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 ATG5Q9H1Y0 275 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 ENY2Q9NPA8 101 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 CLCA1A8K7I4 914 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 A8MVM7 634 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 FAM171A2A8MVW0 826 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TEX46H3BTG2 121 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 L7N2F9 121 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 CHRM4P08173 479 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 P2RX1P51575 399 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 VAMP2P63027 116 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 B4GALNT1Q00973 533 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TSPAN31Q12999 210 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 NIPAL3Q6P499 406 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 NDUFAF7Q7L592 441 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 OR4D9Q8NGE8 314 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 MSL3P1P0C860 447 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 UQCRC1P31930 480 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 PPIAP62937 165 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 PAPD5Q8NDF8 572 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 ASB17Q8WXJ9 295 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 FGF11Q92914 225 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TRPM7Q96QT4 1865 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 NOP16Q9Y3C1 178 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 IGLV3-16A0A075B6K0 115 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TRAV17A0A0B4J275 112 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 APOBEC1P41238 236 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 RPS18P62269 152 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 PRKCDQ05655 676 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 PGGHGQ32M88 737 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 ZNF404Q494X3 552 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 GRINAQ7Z429 371 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 ZNF442Q9H7R0 627 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TEX13DA0A0J9YY54 714 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TMEM225BP0DP42 221 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 IST1P53990 364 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 HNRNPA0Q13151 305 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 SWI5Q1ZZU3 235 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 ATAD3CQ5T2N8 411 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TMEM236Q5W0B7 351 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC6A19Q695T7 634 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 LANCL3Q6ZV70 420 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 RTTNQ86VV8 2226 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 LRRN3E7EW58 273 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 FGF17O60258 216 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 PRKNO60260 465 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 MRPS14O60783 128 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 RAB11BQ15907 218 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 CLPPQ16740 277 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 TMEM244Q5VVB8 128 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 SGCZQ96LD1 299 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 STUB1Q9UNE7 303 aa15.16■□□□□ 0.02
SMARCA4-201ENST00000344626 WNT11O96014 354 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 UCHL1P09936 223 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 FCARP24071 287 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC36A2Q495M3 483 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC16A11Q8NCK7 471 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 MAELQ96JY0 434 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 ANKRD19PQ9H560 264 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 C12orf49Q9H741 205 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 INPP5EQ9NRR6 644 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 C5orf51A6NDU8 294 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 TRABD2BA6NFA1 517 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC1A7O00341 560 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 SCGNO76038 276 aa15.15■□□□□ 0.02
SMARCA4-201ENST00000344626 MBOAT2Q6ZWT7 520 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms