RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ACTC1P68032 377 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 ACTA1P68133 377 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SIM1P81133 766 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-201ENST00000343524 NAAAQ02083 359 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SRSF4Q08170 494 aaKnown RBP7.53□□□□□ -1.2
ATG4A-201ENST00000343524 PJVKQ0ZLH3 352 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 FOXO1Q12778 655 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF792Q3KQV3 632 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SLC25A35Q3KQZ1 300 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 VWA2Q5GFL6 755 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 UBXN11Q5T124 520 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 ARL9Q6T311 187 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF852Q6ZMS4 543 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SLC36A1Q7Z2H8 476 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 TMPRSS11BQ86T26 416 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 RASGEF1AQ8N9B8 481 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 GPRC5AQ8NFJ5 357 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 OR6N1Q8NGY5 312 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 OR52I2Q8NH67 350 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 LGALS14Q8TCE9 139 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 XAGE5Q8WWM1 108 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 HIST1H2BAQ96A08 127 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 C14orf79Q96F83 325 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 S100A16Q96FQ6 103 aaKnown RBP7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SCLYQ96I15 445 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 HSPA12BQ96MM6 686 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 TLNRD1Q9H1K6 362 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SEC61A2Q9H9S3 476 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 MYNNQ9NPC7 610 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 IL17CQ9P0M4 197 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 A4GNTQ9UNA3 340 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 TP53TG5Q9Y2B4 290 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 OR10H1Q9Y4A9 318 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 PCDHGA5Q9Y5G8 931 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 IRAK3Q9Y616 596 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 KIAA1671Q9BY89 1806 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 KMT2BQ9UMN6 2715 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-201ENST00000343524 TP53BP1Q12888 1972 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-201ENST00000343524 J3QRE1 110 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 SLC25A12O75746 678 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 SBK2P0C263 348 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 OR8U8P0C7N1 319 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 C1GALT1C1LP0DN25 315 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 ALPPL2P10696 532 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 APEHP13798 732 aaKnown RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 ATF1P18846 271 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 DLSTP36957 453 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 PKIAP61925 76 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 RAE1P78406 368 aaKnown RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 FAM110CQ1W6H9 321 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 PGGHGQ32M88 737 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 ACSM3Q53FZ2 586 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM244Q5VVB8 128 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 C11orf87Q6NUJ2 197 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM71Q6P5X7 295 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 ENPP7Q6UWV6 458 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 DRAM2Q6UX65 266 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 C1QL4Q86Z23 238 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 LNX2Q8N448 690 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 INO80EQ8NBZ0 244 aaPredicted RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 GPR32P1Q8NGA4 272 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 PIGXQ8TBF5 258 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 CLP1Q92989 425 aaKnown RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 NEURL3Q96EH8 262 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM19Q96HH6 336 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 OR1F2PQ96R84 312 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 VRK1Q99986 396 aaPredicted RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 NRIP2Q9BQI9 281 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 ZCCHC2Q9C0B9 1178 aaKnown RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 OR51I1Q9H343 314 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 NEUROD4Q9HD90 331 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 PRM3Q9NNZ6 103 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 MIEF1Q9NQG6 463 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM100Q9NV29 134 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 KLK14Q9P0G3 267 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 RCC2Q9P258 522 aaKnown RBP7.52□□□□□ -1.2
ATG4A-201ENST00000343524 CRLS1Q9UJA2 301 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 CLEC4AQ9UMR7 237 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 GPR52Q9Y2T5 361 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 ETV7Q9Y603 341 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 KPTNQ9Y664 436 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 FRMPD3Q5JV73 1810 aa7.52□□□□□ -1.2
ATG4A-201ENST00000343524 TRBV5-4A0A0C4DH59 114 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 RNF222A6NCQ9 220 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 ANHXE9PGG2 379 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 TNFRSF10BO14763 440 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 TGM5O43548 720 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 B4GALT3O60512 393 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 GJB3O75712 270 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 CXCL14O95715 111 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 RLN1P04808 185 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 CD1AP06126 327 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 FURINP09958 794 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 CD79AP11912 226 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 VAMP1P23763 118 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 ACVRL1P37023 503 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 NSG1P42857 185 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 POU3F4P49335 361 aa7.52□□□□□ -1.21
ATG4A-201ENST00000343524 PNLIPRP2P54317 469 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms