RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 ABLIM3O94929 683 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 GNRHRP30968 328 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 PRSS3P35030 304 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CLDN12P56749 244 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 LCN6P62502 163 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TANGO2Q6ICL3 276 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 GSG1LQ6UXU4 331 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 FAM83HQ6ZRV2 1179 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CHTF18Q8WVB6 975 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 FAM3CQ92520 227 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 FAM71F1Q96KD3 344 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 KATNBL1Q9H079 304 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 PRSS16Q9NQE7 514 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CPNE7Q9UBL6 633 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 PRELID3BQ9Y3B1 194 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 AP1M2Q9Y6Q5 423 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CDK5RAP2Q96SN8 1893 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 A0A0G2JMP0 313 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 H0YGG7 62 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 FXYD1O00168 92 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 SOCS6O14544 535 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 PRAF2O60831 178 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 SLCO2B1O94956 709 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CBR1P16152 277 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CTRB1P17538 263 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 GPX2P18283 190 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 KIR2DL3P43628 341 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 RGS19P49795 217 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 ARF3P61204 181 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TLE3Q04726 772 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 ACVR1Q04771 509 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TSPAN31Q12999 210 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CTRB2Q6GPI1 263 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 METAP1DQ6UB28 335 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 GTPBP8Q8N3Z3 284 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 OR4M2Q8NGB6 313 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 OR4C15Q8NGM1 316 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 OR6T1Q8NGN1 323 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 BCL7CQ8WUZ0 217 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TMEM255BQ8WV15 326 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 FBXW5Q969U6 566 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TOE1Q96GM8 510 aaKnown RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 KLHL15Q96M94 604 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 URM1Q9BTM9 101 aaKnown RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 MS4A8Q9BY19 250 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 RGCCQ9H4X1 137 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 NUP205Q92621 2012 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 A0A0A6YYJ9 748 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 H3BNC9 293 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 SYT7O43581 403 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 NFYAP23511 347 aaPredicted RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 AGTR1P30556 359 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF84P51523 738 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TRA2BP62995 288 aaKnown RBP7.51□□□□□ -1.21
UBE4B-202ENST00000343090 KCNJ10P78508 379 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 AVPI1Q5T686 147 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 AFMIDQ63HM1 303 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 TMEM184AQ6ZMB5 413 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 NLRC3Q7RTR2 1065 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 FN3KQ9H479 309 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 CDCP1Q9H5V8 836 aa7.51□□□□□ -1.21
UBE4B-202ENST00000343090 SC5DO75845 299 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 PPP3CBP16298 524 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 AQP2P41181 271 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 NXPE3Q969Y0 559 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 ARSGQ96EG1 525 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 TRAF4Q9BUZ4 470 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-202ENST00000343090 NKX6-2Q9C056 277 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-202ENST00000343090 SRRQ9GZT4 340 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 REV1Q9UBZ9 1251 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 ATG4BQ9Y4P1 393 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 A0A0A6YYH2 397 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 A6NJ64 397 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 ACOD1A6NK06 481 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 DOK2O60496 412 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 SNAPINO95295 136 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 GPR75O95800 540 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 TPOP07202 933 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF35P13682 527 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF250P15622 560 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 PCMT1P22061 227 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 SLC1A3P43003 542 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 HNRNPKP61978 463 aaKnown RBP eCLIP7.5□□□□□ -1.211e-15■■■■■ 27
UBE4B-202ENST00000343090 OR7A5Q15622 319 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 PRAMEF8Q5VWM4 474 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 PRAMEF7Q5VXH5 474 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF322Q6U7Q0 402 aaPredicted RBP7.5□□□□□ -1.21
UBE4B-202ENST00000343090 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 PLXDC1Q8IUK5 500 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 OR10K1Q8NGX5 313 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 GPR148Q8TDV2 347 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 SFXN2Q96NB2 322 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 AMDHD1Q96NU7 426 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 TNFRSF13CQ96RJ3 184 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 TIMM29Q9BSF4 260 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 DNTTIP1Q9H147 329 aa7.5□□□□□ -1.21
UBE4B-202ENST00000343090 GDE1Q9NZC3 331 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms