RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ACOXLQ9NUZ1 547 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 POMT2Q9UKY4 750 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 DTX4Q9Y2E6 619 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 PIAS3Q9Y6X2 628 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 USP34Q70CQ2 3546 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 VCANP13611 3396 aa13.38□□□□□ -0.27
TDP2-201ENST00000341060 NUP210LQ5VU65 1888 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 A0A1W2PRG6 482 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 TCRBV21S2A2A0A5A6 115 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 SEMA4FO95754 770 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 CTSBP07858 339 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 GABRG2P18507 467 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 BTCP35070 178 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 LTBRP36941 435 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 CDK5R1Q15078 307 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 TP53I3Q53FA7 332 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 ASB18Q6ZVZ8 466 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 GPR135Q8IZ08 494 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 CADM2Q8N3J6 435 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 FAM98AQ8NCA5 519 aaKnown RBP13.37□□□□□ -0.27
TDP2-201ENST00000341060 OR13C5Q8NGS8 318 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 OR4K13Q8NH42 304 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 GRPEL2Q8TAA5 225 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 THAP4Q8WY91 577 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 ZMYND19Q96E35 227 aaPredicted RBP13.37□□□□□ -0.27
TDP2-201ENST00000341060 PELI1Q96FA3 418 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 RBM18Q96H35 190 aaKnown RBP13.37□□□□□ -0.27
TDP2-201ENST00000341060 ABHD1Q96SE0 405 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 GON7Q9BXV9 100 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 SEMA6CQ9H3T2 930 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 RPS6KB2Q9UBS0 482 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 MAU2Q9Y6X3 613 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.37□□□□□ -0.27
TDP2-201ENST00000341060 PRAMEF26H0Y7S4 382 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 HRKO00198 91 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 GPR143P51810 404 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 HHEXQ03014 270 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 CDONQ4KMG0 1287 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 NPSR1Q6W5P4 371 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 PLCZ1Q86YW0 608 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 CMIPQ8IY22 773 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 ARL14Q8N4G2 192 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 RCBTB1Q8NDN9 531 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 G6PC3Q9BUM1 346 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 GALNT9Q9HCQ5 603 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 MKKSQ9NPJ1 570 aaPredicted RBP13.37□□□□□ -0.27
TDP2-201ENST00000341060 CACNG2Q9Y698 323 aa13.37□□□□□ -0.27
TDP2-201ENST00000341060 TP53BP1Q12888 1972 aaPredicted RBP13.37□□□□□ -0.27
TDP2-201ENST00000341060 A0A1B0GVC2 190 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 ANKRD34BA5PLL1 514 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 A6NIN4 97 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 EEF1E1O43324 174 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 FOXS1O43638 330 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 IGHV4-34P06331 123 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 GDI2P50395 445 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 HCCSP53701 268 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 RAB25P57735 213 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 IGLV3-21P80748 117 aaPredicted RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 STX4Q12846 297 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 EIF2B5Q13144 721 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 MAB21L1Q13394 359 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 C19orf47Q8N9M1 422 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 SGTBQ96EQ0 304 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 GTPBP2Q9BX10 602 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 MFRPQ9BY79 579 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 ZCCHC4Q9H5U6 513 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 Q9N2J8 555 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 IER3IP1Q9Y5U9 82 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 A0A087WUJ7 227 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 A0A0A6YYC8 382 aaPredicted RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 SPTY2D1-AS1A0A0U1RR47 76 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 EFCAB7A8K855 629 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 NOTOA8MTQ0 251 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 I3L1I5 382 aaPredicted RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 GNB5O14775 395 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 HYAL3O43820 417 aaPredicted RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 PRAMEF2O60811 474 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 ARL6IP5O75915 188 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 CD1AP06126 327 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 UCHL1P09936 223 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 EPXP11678 715 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 RNH1P13489 461 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 TYRP1P17643 537 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 ATF1P18846 271 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 EVI2BP34910 448 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 RGS19P49795 217 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 GBX2P52951 348 aaPredicted RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 PSMD4P55036 377 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 SIRPAP78324 504 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
TDP2-201ENST00000341060 ZNF542PQ5EBM4 170 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 ARMC6Q6NXE6 501 aa13.36□□□□□ -0.27
TDP2-201ENST00000341060 SLC35F2Q8IXU6 374 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms