RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 LINC00299Q6ZSB3 139 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 KIF18BQ86Y91 864 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 SHISA5Q8N114 240 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 OR10Q1Q8NGQ4 319 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 APH1BQ8WW43 257 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 PSMF1Q92530 271 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 ADAD1Q96M93 576 aaKnown RBP6.52□□□□□ -1.37
NUP43-201ENST00000340413 SIAEQ9HAT2 523 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 NRIP3Q9NQ35 241 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 RLIMQ9NVW2 624 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 POLHQ9Y253 713 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 EXOSC1Q9Y3B2 195 aaKnown RBP6.52□□□□□ -1.37
NUP43-201ENST00000340413 TMED7Q9Y3B3 224 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 FAM186AA6NE01 2351 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 PCSK5Q92824 1860 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 BDP1A6H8Y1 2624 aa6.52□□□□□ -1.37
NUP43-201ENST00000340413 SPTBN5Q9NRC6 3674 aaKnown RBP6.52□□□□□ -1.37
NUP43-201ENST00000340413 URB1O60287 2271 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 HCRTR2O43614 444 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 GDF9O60383 454 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 WBP4O75554 376 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 P04436 131 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 HPNP05981 417 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 PRKACGP22612 351 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 HTR1FP30939 366 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 PLA2G5P39877 138 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 SOX3P41225 446 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ERFP50548 548 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 UCNP55089 124 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 LGALS3BPQ08380 585 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 FHL1Q13642 323 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 WDR88Q6ZMY6 472 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ZNF367Q7RTV3 350 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MARCH3Q86UD3 253 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 P3H2Q8IVL5 708 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 HS3ST5Q8IZT8 346 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 CLEC1AQ8NC01 280 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ZNF563Q8TA94 476 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 HAS2Q92819 552 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ASPNQ9BXN1 380 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 OR52D1Q9H346 318 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 CDCP1Q9H5V8 836 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MEPEQ9NQ76 525 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 B4GALT7Q9UBV7 327 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 OSGIN1Q9UJX0 560 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 DIMT1Q9UNQ2 313 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 CARD8Q9Y2G2 431 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 PCDHGA9Q9Y5G4 932 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 SNX5Q9Y5X3 404 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 SDK2Q58EX2 2172 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 EP300Q09472 2414 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 TRIM64BA6NI03 449 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MITFO75030 526 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 VAMP5O95183 116 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 AHSA1O95433 338 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 CLPTM1O96005 669 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 CDK1P06493 297 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 UBTFL6P0CB48 400 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 PAICSP22234 425 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 ACTC1P68032 377 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ACTA1P68133 377 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 IL5RAQ01344 420 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 GINS1Q14691 196 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 RPUSD3Q6P087 351 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 POMGNT2Q8NAT1 580 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MDS2Q8NDY4 140 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 OR52J3Q8NH60 311 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 PIGQQ9BRB3 760 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MARCH7Q9H992 704 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 GP6Q9HCN6 339 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 KLRF1Q9NZS2 232 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 CHRNA9Q9UGM1 479 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 B3GALT5Q9Y2C3 310 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MAGED1Q9Y5V3 778 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 NPIPA5A0A0B4J1W7 369 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 MYOCOSA0A1B0GUC4 107 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 SLC22A31A6NKX4 558 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 FTCDNL1E5RQL4 147 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 NPIPA7E9PJI5 369 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 RGS10O43665 173 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 EIF1BO60739 113 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 SLC25A12O75746 678 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 NPIPA8P0DM63 369 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 TACR3P29371 465 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 IDUAP35475 653 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 CYB561P49447 251 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ZNF133P52736 654 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 FBXW4P57775 412 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 Q0VFX4 171 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 ABHD17BQ5VST6 288 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 AADACL4Q5VUY2 407 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 LAIR2Q6ISS4 152 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 TMEM154Q6P9G4 183 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 FAM199XQ6PEV8 388 aaPredicted RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 PTCHD4Q6ZW05 846 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 OR5J2Q8NH18 312 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 SNRNP27Q8WVK2 155 aaKnown RBP6.51□□□□□ -1.37
NUP43-201ENST00000340413 MUL1Q969V5 352 aa6.51□□□□□ -1.37
NUP43-201ENST00000340413 INTS12Q96CB8 462 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms